RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 OVGP1Q12889 678 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 MSLNQ13421 630 aaPredicted RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 PCLAFQ15004 111 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ACAP2Q15057 778 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ZRSR2Q15696 482 aaKnown RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 PPM1JQ5JR12 505 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 LYPLAL1Q5VWZ2 237 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 LIPMQ5VYY2 423 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 MBLAC2Q68D91 279 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 UGT3A1Q6NUS8 523 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 GAREM2Q75VX8 874 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 RAB44Q7Z6P3 723 aaPredicted RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 SLC41A1Q8IVJ1 513 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 C10orf107Q8IVU9 208 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ARID3BQ8IVW6 561 aaPredicted RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 DENND6AQ8IWF6 608 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 HOMEZQ8IX15 550 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ARHGAP24Q8N264 748 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 FITM2Q8N6M3 262 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 LPCAT1Q8NF37 534 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 SPPL3Q8TCT6 385 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ERP27Q96DN0 273 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ZNF419Q96HQ0 510 aaPredicted RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 CDKN2AIPNLQ96HQ2 116 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 TRIB3Q96RU7 358 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 MECRQ9BV79 373 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 LRRC3Q9BY71 257 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 SLC2A11Q9BYW1 496 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ILKAPQ9H0C8 392 aaPredicted RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 MRPL46Q9H2W6 279 aaKnown RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 EML4Q9HC35 981 aaKnown RBP11.17□□□□□ -0.62
SKA2-204ENST00000578519 ABCB8Q9NUT2 735 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 ZDHHC7Q9NXF8 308 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 HEY2Q9UBP5 337 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 VTI1BQ9UEU0 232 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 SLC25A13Q9UJS0 675 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 EMCNQ9ULC0 261 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 CHKBQ9Y259 395 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 NUP205Q92621 2012 aa11.17□□□□□ -0.62
SKA2-204ENST00000578519 MYO18AQ92614 2054 aaKnown RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 CCDC195A0A1B0GUA6 201 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 ANKRD66B4E2M5 251 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 ANKRD65E5RJM6 399 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 CCL16O15467 120 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 SOCS5O75159 536 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 SMIM24O75264 130 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 ZMPSTE24O75844 475 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 UNC5CO95185 931 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 S1PR4O95977 384 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 GOT2P00505 430 aaKnown RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 DLDP09622 509 aaKnown RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 FGF3P11487 239 aaPredicted RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 EZRP15311 586 aaKnown RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 TCF3P15923 654 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 ATP5F1P24539 256 aaPredicted RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 ARNTP27540 789 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 NNMTP40261 264 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 TTPAP49638 278 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 CLCN4P51793 760 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 MNAT1P51948 309 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 DNAJB13P59910 316 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 ARF5P84085 180 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 MPP1Q00013 466 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 GALNT3Q14435 633 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 KRT72Q14CN4 511 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 TTC31Q49AM3 519 aaPredicted RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 FSCBQ5H9T9 825 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 HECTD2Q5U5R9 776 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 FAM91A1Q658Y4 838 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 LRRC8EQ6NSJ5 796 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 CERS6Q6ZMG9 384 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 CMTM8Q8IZV2 173 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 DNAJC5GQ8N7S2 189 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 OR13J1Q8NGT2 312 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 ISG20Q96AZ6 181 aaKnown RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 THOC1Q96FV9 657 aaKnown RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 NSL1Q96IY1 281 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 FAR2Q96K12 515 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 TBATAQ96M53 351 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 TUBGCP5Q96RT8 1024 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 GPR63Q9BZJ6 419 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 CEP44Q9C0F1 390 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 MYLK2Q9H1R3 596 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 ATP13A3Q9H7F0 1226 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 CAB39LQ9H9S4 337 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 MAGEE1Q9HCI5 957 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 GPAMQ9HCL2 828 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 FBXO6Q9NRD1 293 aaPredicted RBP11.16□□□□□ -0.62
SKA2-204ENST00000578519 OXSMQ9NWU1 459 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 DNAJC28Q9NX36 388 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 NCKIPSDQ9NZQ3 722 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 VPS51Q9UID3 782 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 TMCO1Q9UM00 188 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 OR51B4Q9Y5P0 310 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 SLC30A1Q9Y6M5 507 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 COL4A6Q14031 1691 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
SKA2-204ENST00000578519 MUSKO15146 869 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms