RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CHPFQ8IZ52 775 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
SRSF1-202ENST00000578430 CHST14Q8NCH0 376 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 GABPB2Q8TAK5 448 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-202ENST00000578430 STYXQ8WUJ0 223 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 FAM3CQ92520 227 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 VOPP1Q96AW1 172 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 ZNF669Q96BR6 464 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-202ENST00000578430 LYSMD1Q96S90 227 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 CHRAC1Q9NRG0 131 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
SRSF1-202ENST00000578430 HCN2Q9UL51 889 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 SORCS3Q9UPU3 1222 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 NFS1Q9Y697 457 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 WASF2Q9Y6W5 498 aa13.49□□□□□ -0.25
SRSF1-202ENST00000578430 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 TCRBV9S1A1TA0A576 114 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 FAM86C2PA6NEL3 165 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 CAPN8A6NHC0 703 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 C2orf81A6NN90 581 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 C1QTNF3-AMACRE9PGA6 284 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 OPA1O60313 960 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 SIN3BO75182 1162 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 LEFTY1O75610 366 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 SASH3O75995 380 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 TRBC1P01850 177 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 UGT2B4P06133 528 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 EPHX1P07099 455 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 PSMA3P25788 255 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 NTSR1P30989 418 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 GKP32189 559 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 CAMK2GQ13555 558 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-202ENST00000578430 SEPT6Q14141 434 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 RASA2Q15283 850 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 MLF2Q15773 248 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-202ENST00000578430 SKIDA1Q1XH10 827 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 ARSIQ5FYB1 569 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 TMEM31Q5JXX7 168 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 FAM46CQ5VWP2 391 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 KIAA0930Q6ICG6 404 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-202ENST00000578430 USP45Q70EL2 814 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 RIBC1Q8N443 379 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-202ENST00000578430 BLOC1S5Q8TDH9 187 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 FBF1Q8TES7 1133 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 CDKL2Q92772 493 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 SCRN2Q96FV2 425 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 PPP1R16AQ96I34 528 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 KLHL32Q96NJ5 620 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 MCCC1Q96RQ3 725 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-202ENST00000578430 GABRG3Q99928 467 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 PLAC1Q9HBJ0 212 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 CD320Q9NPF0 282 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 C11orf16Q9NQ32 467 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 SLC24A2Q9UI40 661 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 MYO10Q9HD67 2058 aa13.48□□□□□ -0.25
SRSF1-202ENST00000578430 ZCWPW2A0A1B0GU75 182 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 EXOC1LA0A1B0GW35 172 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 GOLGA6L10A6NI86 522 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 LDB2O43679 373 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 SYNCRIPO60506 623 aaKnown RBP13.47□□□□□ -0.25
SRSF1-202ENST00000578430 RNASEH1O60930 286 aaKnown RBP13.47□□□□□ -0.25
SRSF1-202ENST00000578430 EGFP01133 1207 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-202ENST00000578430 HLA-EP13747 358 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 LPOP22079 712 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-202ENST00000578430 ITGB7P26010 798 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 ACVR1Q04771 509 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 MGAT5Q09328 741 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 STARD3Q14849 445 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 LONRF1Q17RB8 773 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 EMC10Q5UCC4 262 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 ZNF852Q6ZMS4 543 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 CAPN12Q6ZSI9 719 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 TPRG1Q6ZUI0 275 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 GLT6D1Q7Z4J2 308 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 MTERF4Q7Z6M4 381 aaKnown RBP13.47□□□□□ -0.25
SRSF1-202ENST00000578430 TDRPQ86YL5 185 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 LMNTD2Q8IXW0 634 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 STK40Q8N2I9 435 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 GOLGA6L1Q8N7Z2 621 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 GRIN3AQ8TCU5 1115 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 EZH1Q92800 747 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-202ENST00000578430 CERS2Q96G23 380 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 SHDQ96IW2 340 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 FAM129BQ96TA1 746 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 TREX1Q9NSU2 369 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 NSMCE4AQ9NXX6 385 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 WNT16Q9UBV4 365 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 PPM1HQ9ULR3 514 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
SRSF1-202ENST00000578430 HCN4Q9Y3Q4 1203 aa13.47□□□□□ -0.25
SRSF1-202ENST00000578430 FAM159BA6NKW6 160 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 UPK3BL1B0FP48 263 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 UPK3BL2E5RIL1 263 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 RASGRF2O14827 1237 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms