RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 RDH14Q9HBH5 336 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 PCDH12Q9NPG4 1184 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 PCDHGA3Q9Y5H0 932 aa10.04□□□□□ -0.8
CALCOCO2-227ENST00000575560 USP9XQ93008 2570 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 FAM170AA1A519 330 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 CFAP69A5D8W1 941 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 GOLGA8SH3BPF8 625 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 HGSO14964 777 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 BUB1BO60566 1050 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 PIGNO95427 931 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 PLEKP08567 350 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 TRIM23P36406 574 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 CASRP41180 1078 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 OR1D5P58170 312 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 KIAA1024LP59773 190 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 RHOAP61586 193 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 SERINC3Q13530 473 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 NR1D2Q14995 579 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 CYTH1Q15438 398 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 CLPPQ16740 277 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 C15orf59Q2T9L4 293 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 CCDC14Q49A88 953 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 SPECC1LQ69YQ0 1117 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 EMC1Q8N766 993 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 CCL4L1Q8NHW4 92 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 GPBAR1Q8TDU6 330 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 CENPIQ92674 756 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 TBC1D31Q96DN5 1066 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 PSMG3-AS1Q96PY0 264 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 TAAR9Q96RI9 348 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 PDCL3Q9H2J4 239 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 DPEP2Q9H4A9 486 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 FGF22Q9HCT0 170 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 MRPL40Q9NQ50 206 aaKnown RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 AKAP7Q9P0M2 348 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 LHX3Q9UBR4 397 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 RWDD2AQ9UIY3 292 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 ANAPC2Q9UJX6 822 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 MAN2B2Q9Y2E5 1009 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 DAAM1Q9Y4D1 1078 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 LRP4O75096 1905 aa10.03□□□□□ -0.8
CALCOCO2-227ENST00000575560 NOTCH2Q04721 2471 aa10.02□□□□□ -0.8
CALCOCO2-227ENST00000575560 LRRK1Q38SD2 2015 aa10.02□□□□□ -0.8
CALCOCO2-227ENST00000575560 IGHV5-10-1A0A0J9YXX1 117 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 B4DGG1 531 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 LSM8O95777 96 aaKnown RBP10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 PCCBP05166 539 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 FGF1P05230 155 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 LIFP15018 202 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 GM2AP17900 193 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 XPAP23025 273 aaPredicted RBP10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 CD1CP29017 333 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 UGT1A3P35503 534 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 MMP12P39900 470 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 ATP1A2P50993 1020 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 YBEYP58557 167 aaPredicted RBP10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 NOMO3P69849 1222 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 SQSTM1Q13501 440 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 GRM3Q14832 879 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 MAP9Q49MG5 647 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 BRAT1Q6PJG6 821 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 STRADAQ7RTN6 431 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 ZSWIM9Q86XI8 627 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 NRROSQ86YC3 692 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 CREBRFQ8IUR6 639 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 RCBTB1Q8NDN9 531 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 RXFP2Q8WXD0 754 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 CPA5Q8WXQ8 436 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 PMEPA1Q969W9 287 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 ZNF641Q96N77 438 aaPredicted RBP10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 NUDT22Q9BRQ3 303 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 LGR4Q9BXB1 951 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 SPATS2LQ9NUQ6 558 aaKnown RBP10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 SDK2Q58EX2 2172 aa10.02□□□□□ -0.81
CALCOCO2-227ENST00000575560 C2CD4BA6NLJ0 364 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 RECQL5O94762 991 aaPredicted RBP10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 FUCA1P04066 466 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 MMEP08473 750 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 PYGBP11216 843 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 CCNB1P14635 433 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 KELP23276 732 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 ALDH4A1P30038 563 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 SDC4P31431 198 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 STAT1P42224 750 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 PTPN9P43378 593 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 GPR3P46089 330 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 CCR10P46092 362 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 LIMK2P53671 638 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 MAZP56270 477 aaKnown RBP10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 HDAC4P56524 1084 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 RALGDSQ12967 914 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 TRA2AQ13595 282 aaKnown RBP eCLIP10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 CDO1Q16878 200 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 AMZ1Q400G9 498 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 TAF3Q5VWG9 929 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 ERAP2Q6P179 960 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 LIPIQ6XZB0 460 aa10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 NOP9Q86U38 636 aaKnown RBP10.01□□□□□ -0.81
CALCOCO2-227ENST00000575560 DNAAF5Q86Y56 855 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms