RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CEP41Q9BYV8 373 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 ATP13A3Q9H7F0 1226 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 NT5MQ9NPB1 228 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 DYRK4Q9NR20 520 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 AASDHPPTQ9NRN7 309 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 UCKL1Q9NWZ5 548 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 B4GALT6Q9UBX8 382 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 AMACRQ9UHK6 382 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 ADGRG1Q9Y653 693 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 HS3ST3A1Q9Y663 406 aa8.73□□□□□ -1.01
SMG6-216ENST00000575176 CFAP69A5D8W1 941 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 A6NNZ2 444 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 K7ESM1 405 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 FLRT2O43155 660 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 HEXIM1O94992 359 aaKnown RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 PCDH8O95206 1070 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 CAPNS1P04632 268 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 CCNB1P14635 433 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 NME1P15531 152 aaKnown RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 PTPN3P26045 913 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 SSR1P43307 286 aaKnown RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 LIG3P49916 1009 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 BNIP3Q12983 259 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 KLF1Q13351 362 aaPredicted RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 LLGL1Q15334 1064 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 TEAD4Q15561 434 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 TSR1Q2NL82 804 aaKnown RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 MARC1Q5VT66 337 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 RFLNAQ6ZTI6 216 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 BBS12Q6ZW61 710 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 SLCO6A1Q86UG4 719 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 KLHDC8BQ8IXV7 354 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 CCDC13Q8IYE1 715 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 EXD1Q8NHP7 514 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 PTCD2Q8WV60 388 aaKnown RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 QKIQ96PU8 341 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMG6-216ENST00000575176 WDR24Q96S15 920 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 LYSMD1Q96S90 227 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 SEMA3CQ99985 751 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 TCEAL2Q9H3H9 227 aaPredicted RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 GDF3Q9NR23 364 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 DDX56Q9NY93 547 aaKnown RBP8.72□□□□□ -1.01
SMG6-216ENST00000575176 PCDHA3Q9Y5H8 950 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 APC2O95996 2303 aa8.72□□□□□ -1.01
SMG6-216ENST00000575176 A0A0J9YYE9 177 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.71□□□□□ -1.02
SMG6-216ENST00000575176 FAM221BA6H8Z2 402 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 CAPN8A6NHC0 703 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 TRIM38O00635 465 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 APOL1O14791 398 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 SPOPO43791 374 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 CST8O60676 142 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 SDC3O75056 442 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 PIAS2O75928 621 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 CPP00450 1065 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 TRBC1P01850 177 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 CELA2BP08218 269 aaPredicted RBP8.71□□□□□ -1.02
SMG6-216ENST00000575176 C1SP09871 688 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 ALPIP09923 528 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 FTH1P19P0C7X4 201 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 AKT2P31751 481 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 ACADVLP49748 655 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 RENBPP51606 427 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 DYNLT1P63172 113 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 FOXK2Q01167 660 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 RAD51Q06609 339 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 BCL2L1Q07817 233 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 ELP6Q0PNE2 266 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 NOMO1Q15155 1222 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 SPA17Q15506 151 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 SLC14A2Q15849 920 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 TFDP3Q5H9I0 405 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 TIGD7Q6NT04 549 aaPredicted RBP8.71□□□□□ -1.02
SMG6-216ENST00000575176 ESRP1Q6NXG1 681 aaKnown RBP8.71□□□□□ -1.02
SMG6-216ENST00000575176 KDELC1Q6UW63 502 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 MACC1Q6ZN28 852 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 Q6ZSR6 202 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 HSD11B1LQ7Z5J1 315 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 TECPR1Q7Z6L1 1165 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 DAAM2Q86T65 1068 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 TTC7BQ86TV6 843 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 MAP7D3Q8IWC1 876 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 RBFAQ8N0V3 343 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 IFT43Q96FT9 208 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 SCRN2Q96FV2 425 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 IMP4Q96G21 291 aaKnown RBP8.71□□□□□ -1.02
SMG6-216ENST00000575176 HES6Q96HZ4 224 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 FEM1CQ96JP0 617 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.02
SMG6-216ENST00000575176 PACSIN2Q9UNF0 486 aaPredicted RBP8.71□□□□□ -1.02
SMG6-216ENST00000575176 PCDHB9Q9Y5E1 797 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 HEY1Q9Y5J3 304 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 RAI2Q9Y5P3 530 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 ST14Q9Y5Y6 855 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 KIF26BQ2KJY2 2108 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.02
SMG6-216ENST00000575176 TCRBV7S2A1N4TA0A589 114 aa8.7□□□□□ -1.02
SMG6-216ENST00000575176 APOC4-APOC2K7ER74 178 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms