RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DDX53Q86TM3 631 aaKnown RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 TTC16Q8NEE8 873 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 MAPK15Q8TD08 544 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 SHCBP1LQ9BZQ2 653 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 MMADHCQ9H3L0 296 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 POMKQ9H5K3 350 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 RC3H2Q9HBD1 1191 aaKnown RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 MRPL17Q9NRX2 175 aaKnown RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 ANKRD36A6QL64 1941 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 CCDC162PA2VCL2 907 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 E9PBE3 544 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 H0Y626 953 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 KLHL41O60662 606 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 CRTAMO95727 393 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 PGM1P36871 562 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 CDKN2DP55273 166 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 PRKAA1Q13131 559 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 SEL1L3Q68CR1 1132 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 TMEM150AQ86TG1 271 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 SPNS2Q8IVW8 549 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 TCEAL8Q8IYN2 117 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 CARNMT1Q8N4J0 409 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 NSMCE3Q96MG7 304 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 SLC22A12Q96S37 553 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 NCKIPSDQ9NZQ3 722 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 MATN2O00339 956 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 HDAC3O15379 428 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 TBL1XO60907 577 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 PEX11AO75192 247 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 CSF2RAP15509 400 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 CR2P20023 1033 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ATP5F1P24539 256 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 CYTH1Q15438 398 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 SLC14A2Q15849 920 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 TECRLQ5HYJ1 363 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 FAM45BPQ6NSW5 357 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 LINGO4Q6UY18 593 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 GLT6D1Q7Z4J2 308 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 TXNDC5Q8NBS9 432 aaKnown RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 OR4L1Q8NH43 312 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 FAM45AQ8TCE6 357 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ZFRQ96KR1 1074 aaKnown RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 PPP1R36Q96LQ0 422 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 TDRD1Q9BXT4 1180 aaKnown RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 RNPEPL1Q9HAU8 725 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 TCF7L2Q9NQB0 619 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 CATSPERZQ9NTU4 200 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 OBSL1O75147 1896 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 NEMP2A6NFY4 417 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 NEMP1O14524 444 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 DCXO43602 365 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 SLC4A1P02730 911 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 SPATA31D3P0C874 917 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 TFEBP19484 476 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 HK2P52789 917 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 WDR5P61964 334 aaKnown RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ARF5P84085 180 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 DNAL1Q4LDG9 190 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 FSCBQ5H9T9 825 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 SPATA31D4Q6ZUB0 917 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 CMTR2Q8IYT2 770 aaKnown RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 POU5F2Q8N7G0 328 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ARL14EPQ8N8R7 260 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ANKRD49Q8WVL7 239 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 UBXN10Q96LJ8 280 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ZNF334Q9HCZ1 680 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 NOP53Q9NZM5 478 aaKnown RBP14.09□□□□□ -0.15
VPS33B-208ENST00000574755 ZDHHC2Q9UIJ5 367 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 PCDHGC4Q9Y5F7 938 aa14.09□□□□□ -0.15
VPS33B-208ENST00000574755 GOLGA8QA0A0J9YX86 632 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 TYW5A2RUC4 315 aaKnown RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 GOLGA8OA6NCC3 632 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 GOLGA8NF8WBI6 632 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 TEX28O15482 410 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 ITGB8P26012 769 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 PMLP29590 882 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 SEMA3AQ14563 771 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 ACAP2Q15057 778 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 SWT1Q5T5J6 900 aaKnown RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 GPR158Q5T848 1215 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 TXNDC8Q6A555 127 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 TRIM67Q6ZTA4 783 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 PIWIL4Q7Z3Z4 852 aaKnown RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 SDCCAG8Q86SQ7 713 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 ITIH5Q86UX2 942 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 PIM3Q86V86 326 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 LSMEM2Q8N112 164 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 LPCAT1Q8NF37 534 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 GPR150Q8NGU9 434 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 PDCD6IPQ8WUM4 868 aaKnown RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 CDKN2AIPNLQ96HQ2 116 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 FAM161BQ96MY7 647 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 OR52B2Q96RD2 323 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 YME1L1Q96TA2 773 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 C1orf21Q9H246 121 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 STOML2Q9UJZ1 356 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 SPO11Q9Y5K1 396 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms