RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 RAPH1Q70E73 1250 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 NUDCD3Q8IVD9 361 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 CCDC63Q8NA47 563 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 MDGA1Q8NFP4 955 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 OR13C4Q8NGS5 318 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 PPP2R3CQ969Q6 453 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 SLC28A3Q9HAS3 691 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 FBXO6Q9NRD1 293 aaPredicted RBP29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 SIRPGQ9P1W8 387 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 EMCNQ9ULC0 261 aa29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 RPL26L1Q9UNX3 145 aaKnown RBP29.23■■■□□ 2.27
CTDNEP1-208ENST00000573600 GOT2P00505 430 aaKnown RBP29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 SRCP12931 536 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 BGNP21810 368 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 LPOP22079 712 aaPredicted RBP29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 EPHB1P54762 984 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 SNRPD1P62314 119 aaKnown RBP29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 BCL2L1Q07817 233 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 ATG16L1Q676U5 607 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 MRNIPQ6NTE8 343 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 ACVR1CQ8NER5 493 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 OR2AP1Q8NGE2 309 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 MYO19Q96H55 970 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 CDKN2AIPNLQ96HQ2 116 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 TSNARE1Q96NA8 513 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 PLCD4Q9BRC7 762 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 SLCO1B3Q9NPD5 702 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 EVLQ9UI08 416 aaPredicted RBP29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 PCDHB9Q9Y5E1 797 aa29.22■■■□□ 2.27
CTDNEP1-208ENST00000573600 SOCS5O75159 536 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 PGLSO95336 258 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 IL1BP01584 269 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 COL6A2P12110 1019 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 STMN1P16949 149 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 CRABP2P29373 138 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 RAB10P61026 200 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 TMPRSS15P98073 1019 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 DLG2Q15700 870 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 ASTLQ6HA08 431 aaPredicted RBP29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 CGB2Q6NT52 195 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 C16orf46Q6P387 395 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 SCG3Q8WXD2 468 aaKnown RBP29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 CEP44Q9C0F1 390 aa29.21■■■□□ 2.27
CTDNEP1-208ENST00000573600 ATXN2Q99700 1313 aaKnown RBP29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 CCDC162PA2VCL2 907 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 CD3EAPO15446 510 aaKnown RBP29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 BUD23O43709 281 aaKnown RBP29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 PROCP04070 461 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 OGNP20774 298 aaKnown RBP29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 SLC41A1Q8IVJ1 513 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 VN1R2Q8NFZ6 395 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 OR4L1Q8NH43 312 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 E2F7Q96AV8 911 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 ELMO2Q96JJ3 720 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 ATP13A3Q9H7F0 1226 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 TMEM216Q9P0N5 145 aa29.2■■■□□ 2.27
CTDNEP1-208ENST00000573600 C2orf16Q68DN1 1984 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 CCL22O00626 93 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 ZNF821O75541 412 aaPredicted RBP29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 GSRP00390 522 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 SLC8A1P32418 973 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 CTSOP43234 321 aaPredicted RBP29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 SLC12A2P55011 1212 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 DGKKQ5KSL6 1271 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 CNSTQ6PJW8 725 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 KIAA0907Q7Z7F0 614 aaPredicted RBP29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 SDCCAG8Q86SQ7 713 aaPredicted RBP29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 GPATCH11Q8N954 259 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 TSSK1BQ9BXA7 367 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 MAGEE1Q9HCI5 957 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 CATSPERZQ9NTU4 200 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 ARL2BPQ9Y2Y0 163 aa29.2■■■□□ 2.26
CTDNEP1-208ENST00000573600 AURKAO14965 403 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 HTRA2O43464 458 aaPredicted RBP29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 S1PR4O95977 384 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 SAT1P21673 171 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 PTPRCAPQ14761 206 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 AFTPHQ6ULP2 937 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 OTOAQ7RTW8 1153 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 CAMK1DQ8IU85 385 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 OR4K2Q8NGD2 314 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 OSCP1Q8WVF1 389 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 RPL10LQ96L21 214 aaKnown RBP29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 GDF15Q99988 308 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 MECRQ9BV79 373 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 SUDS3Q9H7L9 328 aaPredicted RBP29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 DUS2Q9NX74 493 aaKnown RBP29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 CORO1CQ9ULV4 474 aaPredicted RBP29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 ACOT9Q9Y305 439 aa29.19■■■□□ 2.26
CTDNEP1-208ENST00000573600 OR51F1A6NGY5 319 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 TRAFD1O14545 582 aaPredicted RBP29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 FSHRP23945 695 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 ABL2P42684 1182 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 ECT2LQ008S8 904 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 C22orf39Q6P5X5 142 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 YTHDF3Q7Z739 585 aaKnown RBP29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 AHI1Q8N157 1196 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 PLD6Q8N2A8 252 aaKnown RBP29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 PCDH20Q8N6Y1 951 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms