RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GALNT2Q10471 571 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 TARDBPQ13148 414 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMG6-212ENST00000573153 PDK2Q15119 407 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 PTPRRQ15256 657 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 ALG11Q2TAA5 492 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 ALG1LQ6GMV1 187 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 PDCD7Q8N8D1 485 aaKnown RBP17.4■□□□□ 0.38
SMG6-212ENST00000573153 CCDC42Q96M95 316 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 ZNF670Q9BS34 389 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 BOCQ9BWV1 1114 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 B4GALT6Q9UBX8 382 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 INTUQ9ULD6 942 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 PCDHGC4Q9Y5F7 938 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 ASXL3Q9C0F0 2248 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 AKR1B15C9JRZ8 316 aaPredicted RBP17.39■□□□□ 0.37
SMG6-212ENST00000573153 TPP1O14773 563 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 SOCS5O75159 536 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 RECQL5O94762 991 aaPredicted RBP17.39■□□□□ 0.37
SMG6-212ENST00000573153 KRT7P08729 469 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 ARHGAP25P42331 645 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 PEX5P50542 639 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 BCL2L1Q07817 233 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 SLC10A2Q12908 348 aaPredicted RBP17.39■□□□□ 0.37
SMG6-212ENST00000573153 C1orf61Q13536 156 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 KRT81Q14533 505 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 NFATC4Q14934 902 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 RTP5Q14D33 572 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 LRRC14Q15048 493 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 DEFB133Q30KQ1 61 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 RALGPS1Q5JS13 557 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 VSIG1Q86XK7 387 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 RHOT2Q8IXI1 618 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 FATE1Q969F0 183 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 COQ10AQ96MF6 247 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 SMIM14Q96QK8 99 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 C1QTNF7Q9BXJ2 289 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 APOBEC3BQ9UH17 382 aaKnown RBP17.39■□□□□ 0.37
SMG6-212ENST00000573153 RAXQ9Y2V3 346 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 ACACAQ13085 2346 aa17.39■□□□□ 0.37
SMG6-212ENST00000573153 A0A1W2PNU3 283 aaPredicted RBP17.38■□□□□ 0.37
SMG6-212ENST00000573153 C3orf70A6NLC5 250 aaPredicted RBP17.38■□□□□ 0.37
SMG6-212ENST00000573153 ZNF487B1APH4 448 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 MAP3K6O95382 1288 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 GARSP41250 739 aaKnown RBP17.38■□□□□ 0.37
SMG6-212ENST00000573153 INPP5AQ14642 412 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 CNGA3Q16281 694 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 ANKRD20A8PQ5CZ79 823 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 ZCCHC8Q6NZY4 707 aaKnown RBP17.38■□□□□ 0.37
SMG6-212ENST00000573153 ERAP2Q6P179 960 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 GUSBP11Q6P575 273 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 MAP7D3Q8IWC1 876 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 SLC35F3Q8IY50 421 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 ATPAF2Q8N5M1 289 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 SLC35G2Q8TBE7 412 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 LMX1AQ8TE12 382 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 LRRN4Q8WUT4 740 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 RAPGEF5Q92565 580 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 PDXPQ96GD0 296 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 MCCC1Q96RQ3 725 aaPredicted RBP17.38■□□□□ 0.37
SMG6-212ENST00000573153 APOOQ9BUR5 198 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 SPTLC3Q9NUV7 552 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 SALL4Q9UJQ4 1053 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 PPIL1Q9Y3C6 166 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 OR1A2Q9Y585 309 aa17.38■□□□□ 0.37
SMG6-212ENST00000573153 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.37■□□□□ 0.37
SMG6-212ENST00000573153 A0A1W2PQ67 120 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 EME2A4GXA9 379 aaPredicted RBP17.37■□□□□ 0.37
SMG6-212ENST00000573153 LMO7DNF2Z398 122 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 H3BM21 787 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 YY2O15391 372 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 TLX3O43711 291 aaPredicted RBP17.37■□□□□ 0.37
SMG6-212ENST00000573153 OPA1O60313 960 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 PCCBP05166 539 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 GP1BAP07359 652 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 PDHA1P08559 390 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 TSHRP16473 764 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 XPAP23025 273 aaPredicted RBP17.37■□□□□ 0.37
SMG6-212ENST00000573153 TRIM23P36406 574 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 HK3P52790 923 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 THOP1P52888 689 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 KIAA1024LP59773 190 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 GBE1Q04446 702 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 MTM1Q13496 603 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 PTK2BQ14289 1009 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 PERM1Q5SV97 790 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 C6orf132Q5T0Z8 1188 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 TC2NQ8N9U0 490 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 ARRDC2Q8TBH0 407 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 PIH1D2Q8WWB5 315 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 DUSP23Q9BVJ7 150 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 LGR4Q9BXB1 951 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 USP29Q9HBJ7 922 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 FGF22Q9HCT0 170 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 PCDHB1Q9Y5F3 818 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 ADAMTS20P59510 1910 aa17.37■□□□□ 0.37
SMG6-212ENST00000573153 NBEAQ8NFP9 2946 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 FAM208BQ5VWN6 2430 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 A0A0U1RQS6 177 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 NEMP2A6NFY4 417 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms