RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 TRIM32Q13049 653 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 DSC3Q14574 896 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 RFTN1Q14699 578 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 GPR162Q16538 588 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 PAOXQ6QHF9 649 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 MON1AQ86VX9 555 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 LRRC49Q8IUZ0 686 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 PGBD5Q8N414 524 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 IGSF8Q969P0 613 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 TBATAQ96M53 351 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 SLC39A3Q9BRY0 314 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 SEMA6AQ9H2E6 1030 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 MEAF6Q9HAF1 191 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 EML4Q9HC35 981 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 ATP13A1Q9HD20 1204 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.61
RPAIN-212ENST00000573126 AP4B1Q9Y6B7 739 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 SCN10AQ9Y5Y9 1956 aa11.27□□□□□ -0.61
RPAIN-212ENST00000573126 MYOCOSA0A1B0GUC4 107 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 KPNA6O60684 536 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 OR6B1O95007 311 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 CSPG5O95196 566 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 S1PR4O95977 384 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 RBP1P09455 135 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 SATB1Q01826 763 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 ACAP2Q15057 778 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 C6orf52Q5T4I8 152 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 IL23RQ5VWK5 629 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 RAP1GAP2Q684P5 730 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 CWF19L1Q69YN2 538 aaKnown RBP11.26□□□□□ -0.61
RPAIN-212ENST00000573126 REP15Q6BDI9 236 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 CYHR1Q6ZMK1 362 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 CHSY3Q70JA7 882 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 ISCA2Q86U28 154 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF683Q8IZ20 524 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 ATAD1Q8NBU5 361 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 BLOC1S5Q8TDH9 187 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 TRIB2Q92519 343 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 PTERQ96BW5 349 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 CCDC126Q96EE4 140 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 TSPAN17Q96FV3 270 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 SLC39A13Q96H72 371 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 C1orf74Q96LT6 269 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 GSTO2Q9H4Y5 243 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 PRDM5Q9NQX1 630 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-212ENST00000573126 RGS18Q9NS28 235 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 BCAP29Q9UHQ4 241 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 APPL1Q9UKG1 709 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 TRAF6Q9Y4K3 522 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 PTGDR2Q9Y5Y4 395 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 ARL5AQ9Y689 179 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 PRSS51A0A1B0GVH4 220 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 TRIM38O00635 465 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 PPP6CO00743 305 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 CYBAP13498 195 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 NME5P56597 212 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 FBXL22Q6P050 247 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 CYP2R1Q6VVX0 501 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 AFAP1L2Q8N4X5 818 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 STON2Q8WXE9 905 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 ASB9Q96DX5 294 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 VPS45Q9NRW7 570 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 NOD1Q9Y239 953 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 TBC1D30Q9Y2I9 924 aa11.26□□□□□ -0.61
RPAIN-212ENST00000573126 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-212ENST00000573126 SCN4AP35499 1836 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 PRORSD1PA6NEY8 169 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 MROH6A6NGR9 719 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 WASH4PA8MWX3 477 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 SLC7A4O43246 635 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 LDB2O43679 373 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 SIX3O95343 332 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 RHOQP17081 205 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 TYMPP19971 482 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 ACVRL1P37023 503 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 NDST2P52849 883 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 CDKL1Q00532 357 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 LRP8Q14114 963 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 GALNT3Q14435 633 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 SQLEQ14534 574 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 NRF1Q16656 503 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 GEN1Q17RS7 908 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 ARRDC2Q8TBH0 407 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 DLG3Q92796 817 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 DNAJC1Q96KC8 554 aaKnown RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 B3GALT6Q96L58 329 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 C3orf30Q96M34 536 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 RPRD1AQ96P16 312 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 SEMA3CQ99985 751 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 ARHGAP39Q9C0H5 1083 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 EPS15L1Q9UBC2 864 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 GIMAP2Q9UG22 337 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 SCML2Q9UQR0 700 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 TRPM7Q96QT4 1865 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 LRRC14BA6NHZ5 514 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 C9JVG2 144 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms