RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TBC1D3CQ6IPX1 549 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 GLRX5Q86SX6 157 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TMTC1Q8IUR5 882 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 KATNAL2Q8IYT4 538 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 TBC1D3Q8IZP1 549 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 DENND6BQ8NEG7 585 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 PIH1D2Q8WWB5 315 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 THAP11Q96EK4 314 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 ZNF641Q96N77 438 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 LGMNQ99538 433 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 ELF4Q99607 663 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 CINPQ9BW66 212 aaPredicted RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 SUV39H2Q9H5I1 410 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 ERVMER34-1Q9H9K5 563 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 MBNL1Q9NR56 388 aaKnown RBP8.75□□□□□ -1.01
SMG6-210ENST00000572205 TM7SF3Q9NS93 570 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 DONSONQ9NYP3 566 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 IMPACTQ9P2X3 320 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 SEPT3Q9UH03 358 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 ATP8A1Q9Y2Q0 1164 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 PPIL1Q9Y3C6 166 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 U3KQA8 63 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 RP1P56715 2156 aa8.75□□□□□ -1.01
SMG6-210ENST00000572205 A0A0U1RQS6 177 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SPAARA0A1B0GVQ0 90 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 NPIPB15A6NHN6 443 aaPredicted RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 TLR4O00206 839 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 MATN3O15232 486 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SLC31A1O15431 190 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 DAPK3O43293 454 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 TSPAN6O43657 245 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 OPHN1O60890 802 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SOCS5O75159 536 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SOD1P00441 154 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 PDHA1P08559 390 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 KRT10P13645 584 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 C6P13671 934 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 CEACAM1P13688 526 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 CCNCP24863 283 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 PTPN7P35236 360 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 CYLC1P35663 651 aaPredicted RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 MMP13P45452 471 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 CCT8P50990 548 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 NOVA1P51513 510 aaKnown RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 RPS21P63220 83 aaKnown RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 IL9RQ01113 521 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 DSC2Q02487 901 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 HNRNPDQ14103 355 aaKnown RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 FZD2Q14332 565 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 IRF4Q15306 451 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 CNGA3Q16281 694 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 CDKN3Q16667 212 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 WSCD2Q2TBF2 565 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 UAP1L1Q3KQV9 507 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 PRAMEF14Q5SWL7 426 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 AADACL2Q6P093 401 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 BRAT1Q6PJG6 821 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SPOCD1Q6ZMY3 1216 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 DPPA4Q7L190 304 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 NT5DC3Q86UY8 548 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 ZNF354CQ86Y25 554 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 LRRC49Q8IUZ0 686 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 RHOT1Q8IXI2 618 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SPC24Q8NBT2 197 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 TRIB3Q96RU7 358 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 BAG1Q99933 345 aaPredicted RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 TDRD1Q9BXT4 1180 aaKnown RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 SLC17A9Q9BYT1 436 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 BRD8Q9H0E9 1235 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SAE1Q9UBE0 346 aaPredicted RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 COQ6Q9Y2Z9 468 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 PCDHGC4Q9Y5F7 938 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
SMG6-210ENST00000572205 SMG1Q96Q15 3661 aaKnown RBP8.74□□□□□ -1.01
SMG6-210ENST00000572205 SPTY2D1-AS1A0A0U1RR47 76 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 KCNK1O00180 336 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 SNPHO15079 494 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 MMP20O60882 483 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 PGLSO95336 258 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 PAK4O96013 591 aaPredicted RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 THEGLP0DJG4 465 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 CTNNA2P26232 953 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 SERPINA4P29622 427 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 CD68P34810 354 aaPredicted RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 HSPA9P38646 679 aaKnown RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 SCNN1BP51168 640 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 SUOXP51687 545 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 SKOR1P84550 965 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 SHC2P98077 582 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 WASHC5Q12768 1159 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 OVGP1Q12889 678 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 EIF2B5Q13144 721 aaKnown RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 ZNF235Q14590 738 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 GRM3Q14832 879 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 PPP2R5EQ16537 467 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 IFI16Q16666 785 aaKnown RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 RALGPS1Q5JS13 557 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 FBXL19Q6PCT2 694 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms