RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 SETDB1Q15047 1291 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 CYTH1Q15438 398 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 SPRED3Q2MJR0 410 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 KIAA1958Q8N8K9 716 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 MAFAQ8NHW3 353 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-208ENST00000571043 TMA16Q96EY4 203 aaKnown RBP17.42■□□□□ 0.38
RPAIN-208ENST00000571043 TRIB3Q96RU7 358 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 MUC3BQ9H195 1237 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 NPHS2Q9NP85 383 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 TMEM216Q9P0N5 145 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 CFAP97Q9P2B7 532 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 FBXO5Q9UKT4 447 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 H0Y626 953 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 INSIG1O15503 277 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 SNNO75324 88 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-208ENST00000571043 LUC7L3O95232 432 aaKnown RBP17.42■□□□□ 0.38
RPAIN-208ENST00000571043 COL6A2P12110 1019 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 SLC1A2P43004 574 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 OCRLQ01968 901 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 ACVR1Q04771 509 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 STX3Q13277 289 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 USP10Q14694 798 aaKnown RBP17.42■□□□□ 0.38
RPAIN-208ENST00000571043 ZNF77Q15935 545 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 DENND6AQ8IWF6 608 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 CPXM2Q8N436 756 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 FITM2Q8N6M3 262 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 OR13J1Q8NGT2 312 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 RIN3Q8TB24 985 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 MFSD1Q9H3U5 465 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 NOD2Q9HC29 1040 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 THAP1Q9NVV9 213 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 OBP2AQ9NY56 170 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 EPS15L1Q9UBC2 864 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 GGT7Q9UJ14 662 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 MID2Q9UJV3 735 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 TLK1Q9UKI8 766 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 SLC39A10Q9ULF5 831 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 SH3BP1Q9Y3L3 701 aa17.42■□□□□ 0.38
RPAIN-208ENST00000571043 CBX4O00257 560 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 LDB2O43679 373 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 ZMPSTE24O75844 475 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 DNAJC8O75937 253 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-208ENST00000571043 UBOX5O94941 541 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 APOA4P06727 396 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 GLDCP23378 1020 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 CRABP2P29373 138 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 VIPR2P41587 438 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 ABCG1P45844 678 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 MPP1Q00013 466 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 NSUN2Q08J23 767 aaKnown RBP eCLIP17.41■□□□□ 0.38
RPAIN-208ENST00000571043 OVGP1Q12889 678 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 BNIP1Q12981 228 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 USP4Q13107 963 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 CTBP1Q13363 440 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 SMAD2Q15796 467 aaKnown RBP17.41■□□□□ 0.38
RPAIN-208ENST00000571043 TAF1BQ53T94 588 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-208ENST00000571043 INO80DQ53TQ3 878 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-208ENST00000571043 SPDYAQ5MJ70 313 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 MBLAC2Q68D91 279 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 ZNF470Q6ECI4 717 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 CCDC91Q7Z6B0 441 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 CARNMT1Q8N4J0 409 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 BRSK1Q8TDC3 778 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 THOC1Q96FV9 657 aaKnown RBP17.41■□□□□ 0.38
RPAIN-208ENST00000571043 LRRC3BQ96PB8 259 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 NUDCD1Q96RS6 583 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 CAB39LQ9H9S4 337 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 ZFP14Q9HCL3 533 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 COPG2Q9UBF2 871 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 ACTL7AQ9Y615 435 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 SHROOM3Q8TF72 1996 aa17.41■□□□□ 0.38
RPAIN-208ENST00000571043 GJB3O75712 270 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 SERPINE1P05121 402 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 FCARP24071 287 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 GRK2P25098 689 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 LEPRP48357 1165 aaKnown RBP17.4■□□□□ 0.38
RPAIN-208ENST00000571043 IRX4P78413 519 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 ARF5P84085 180 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 SLC12A1Q13621 1099 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 PCLAFQ15004 111 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 DLG2Q15700 870 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 PUS10Q3MIT2 529 aaKnown RBP17.4■□□□□ 0.38
RPAIN-208ENST00000571043 MPP7Q5T2T1 576 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 TANGO2Q6ICL3 276 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 ACVR1CQ8NER5 493 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 PPP1R14CQ8TAE6 165 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 RSPRY1Q96DX4 576 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 TSNARE1Q96NA8 513 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 LRRC37BQ96QE4 947 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 PHF7Q9BWX1 381 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-208ENST00000571043 SCUBE2Q9NQ36 999 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.4■□□□□ 0.38
RPAIN-208ENST00000571043 OR51B4Q9Y5P0 310 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 CAPN7Q9Y6W3 813 aa17.4■□□□□ 0.38
RPAIN-208ENST00000571043 FAM95CA0A1B0GW59 222 aa17.39■□□□□ 0.37
RPAIN-208ENST00000571043 F7P08709 466 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-208ENST00000571043 DLDP09622 509 aaKnown RBP17.39■□□□□ 0.37
RPAIN-208ENST00000571043 FGF3P11487 239 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-208ENST00000571043 CPA3P15088 417 aa17.39■□□□□ 0.37
RPAIN-208ENST00000571043 RGRP47804 291 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms