RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 POLD3Q15054 466 aaPredicted RBP10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 AGERQ15109 404 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 OLFML1Q6UWY5 402 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 LEKR1Q6ZMV7 388 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 FAM183BPQ6ZVS7 135 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 DRC7Q8IY82 874 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 KIAA1524Q8TCG1 905 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZDHHC1Q8WTX9 485 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 INTS4Q96HW7 963 aaKnown RBP10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 TEFMQ96QE5 360 aaKnown RBP10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 NPY6RQ99463 290 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 CTRCQ99895 268 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 INTS2Q9H0H0 1204 aaKnown RBP10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 CYP4F12Q9HCS2 524 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 ARMCX3Q9UH62 379 aaPredicted RBP10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 HPSEQ9Y251 543 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 TMEM184BQ9Y519 407 aaPredicted RBP10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 APCP25054 2843 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 CELSR1Q9NYQ6 3014 aa10.5□□□□□ -0.73
CTDNEP1-202ENST00000570380 ADGRG4Q8IZF6 3080 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 CSMD2Q7Z408 3487 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 IGHV1OR21-1A0A087WYE8 117 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 CXorf51AA0A1B0GTR3 108 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 TNFRSF10CO14798 259 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 PPM1DO15297 605 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 PMM2O15305 246 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 THAP12O43422 761 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 ECEL1O95672 775 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 GPR3P46089 330 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 COPB1P53618 953 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 PMS1P54277 932 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 KIAA1024LP59773 190 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 MC2RQ01718 297 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 MRPL49Q13405 166 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 TMEM71Q6P5X7 295 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 C11orf57Q6ZUT1 292 aaPredicted RBP10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 KDELC2Q7Z4H8 507 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 NRROSQ86YC3 692 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 PATE1Q8WXA2 126 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 HMCESQ96FZ2 354 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZYG11BQ9C0D3 744 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 NDFIP2Q9NV92 336 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 DONSONQ9NYP3 566 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 DKK3Q9UBP4 350 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 ERRFI1Q9UJM3 462 aaPredicted RBP10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 RCOR1Q9UKL0 485 aa10.49□□□□□ -0.73
CTDNEP1-202ENST00000570380 TCP11X1B4DZS4 312 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 CACNB4O00305 520 aaPredicted RBP10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 INSIG1O15503 277 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZW10O43264 779 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 RFPL1O75677 317 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 STK17BO94768 372 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 LDLRP01130 860 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 ERBB2P04626 1255 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 CCNB1P14635 433 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 CMA1P23946 247 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 GRNP28799 593 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 GNA15P30679 374 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 STAT5AP42229 794 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 PRCPP42785 496 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 SULT1E1P49888 294 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 LIG3P49916 1009 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 SLC6A3Q01959 620 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 ELP6Q0PNE2 266 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 ERV3-1Q14264 604 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 NADK2Q4G0N4 442 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 ANKRD40Q6AI12 368 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 CEACAM20Q6UY09 585 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 SLC26A9Q7LBE3 791 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 TMEM135Q86UB9 458 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 NETO2Q8NC67 525 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 NT5C3BQ969T7 300 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 PGAP3Q96FM1 320 aaPredicted RBP10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 TCTN2Q96GX1 697 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 LGR4Q9BXB1 951 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 GTPBP4Q9BZE4 634 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 TTYH3Q9C0H2 523 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 TRIT1Q9H3H1 467 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 APMAPQ9HDC9 416 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 PDP2Q9P2J9 529 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 MOSPD1Q9UJG1 213 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 PDZD2O15018 2839 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 MED13LQ71F56 2210 aa10.48□□□□□ -0.73
CTDNEP1-202ENST00000570380 TRIM49BA6NDI0 452 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 SORBS2O94875 1100 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 DLGAP3O95886 979 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 FUCA1P04066 466 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 NEFLP07196 543 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 HOXC4P09017 264 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 XPAP23025 273 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 AK4P27144 223 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 SYKP43405 635 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 SUOXP51687 545 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 PMS2P54278 862 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 GEMIN4P57678 1058 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 DEUP1Q05D60 604 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 RAD51Q06609 339 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 UGP2Q16851 508 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 ACBD5Q5T8D3 534 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms