RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SRBD1Q8N5C6 995 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 FRMD1Q8N878 549 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 TMEM116Q8NCL8 245 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 GDPD5Q8WTR4 605 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 PIGKQ92643 395 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 ARHGEF2Q92974 986 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 CMTM3Q96MX0 182 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 FCRL5Q96RD9 977 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 MEIS3Q99687 375 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 LRRCC1Q9C099 1032 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 SCPEP1Q9HB40 452 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 CPNE5Q9HCH3 593 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 ADARB2Q9NS39 739 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 ATP8A2Q9NTI2 1148 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 MIS18AQ9NYP9 233 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 KIAA1456Q9P272 454 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 CTNNAL1Q9UBT7 734 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 ADAM18Q9Y3Q7 739 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 CLDN16Q9Y5I7 305 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 SNX8Q9Y5X2 465 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 PHRF1Q9P1Y6 1649 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 POLR2AP24928 1970 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 NFAT5O94916 1531 aa3.9□□□□□ -1.79
UBR1-211ENST00000569971 MARF1Q9Y4F3 1742 aaKnown RBP3.9□□□□□ -1.79
UBR1-211ENST00000569971 NWD1Q149M9 1564 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 N4BP2Q86UW6 1770 aaPredicted RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 OVOS2A0A0G2JMS6 1433 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 NPHP4O75161 1426 aaPredicted RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 FRMD3A2A2Y4 597 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 TMEM247A6NEH6 219 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 TARM1B6A8C7 271 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 POC1B-GALNT4F8VUJ3 575 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 MASP2O00187 686 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 MSI1O43347 362 aaKnown RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 PGM3O95394 542 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 NFATC1O95644 943 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 DDAH2O95865 285 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 DNTTP04053 509 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 UBTFL1P0CB47 393 aaPredicted RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 NHLRC4P0CG21 123 aaPredicted RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 ZNF8P17098 575 aaPredicted RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 EDN2P20800 178 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 TTKP33981 857 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 CYP2J2P51589 502 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 ARSFP54793 590 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 SNX16P57768 344 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 CEBPZQ03701 1054 aaKnown RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 FRG1Q14331 258 aaKnown RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 ME3Q16798 604 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 EDRF1Q3B7T1 1238 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 C5orf22Q49AR2 442 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 C1orf141Q5JVX7 400 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 COLEC12Q5KU26 742 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 AKNAD1Q5T1N1 836 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 VWA5B1Q5TIE3 1220 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 RBM44Q6ZP01 1051 aaKnown RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 G2E3Q7L622 706 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 CHSY1Q86X52 802 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 TAGAPQ8N103 731 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 ARL14EPQ8N8R7 260 aaPredicted RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 NTN5Q8WTR8 489 aaPredicted RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 KAT2AQ92830 837 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 SMARCE1Q969G3 411 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 RITA1Q96K30 269 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 ASB2Q96Q27 587 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 YME1L1Q96TA2 773 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 SLF1Q9BQI6 1058 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 SMARCAD1Q9H4L7 1026 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 KAT14Q9H8E8 782 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 ERVK-5Q9HDB9 667 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 ENTPD7Q9NQZ7 604 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 SLC17A6Q9P2U8 582 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 ISY1Q9ULR0 285 aaKnown RBP3.89□□□□□ -1.79
UBR1-211ENST00000569971 A4GNTQ9UNA3 340 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 TMEM5Q9Y2B1 443 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 PCDHGB5Q9Y5G0 923 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 COX11Q9Y6N1 276 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 KIF1AQ12756 1690 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 AOX1Q06278 1338 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 CEMIPQ8WUJ3 1361 aa3.89□□□□□ -1.79
UBR1-211ENST00000569971 ADAMTSL3P82987 1691 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 LMO7Q8WWI1 1683 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 CYP2D7A0A087X1C5 515 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 A0A1W2PQ09 198 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 LRRC53A6NM62 1247 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 BTBD18B2RXH4 712 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 UBE2Q2LH0YL09 131 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 BCAT2O15382 392 aaPredicted RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 ERAL1O75616 437 aaKnown RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 HEXAP06865 529 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 ADRB2P07550 413 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 SLC2A4P14672 509 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 MX1P20591 662 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 KLRC2P26717 231 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 GCH1P30793 250 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 HOXA7P31268 230 aaPredicted RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 PSMB10P40306 273 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms