RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 ERMARDQ5T6L9 678 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 SRLQ86TD4 932 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 CAMK1DQ8IU85 385 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 ARL10Q8N8L6 244 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 OR6C4Q8NGE1 309 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 TSACCQ96A04 125 aaPredicted RBP13.22□□□□□ -0.29
SPG7-221ENST00000569720 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
SPG7-221ENST00000569720 WDR92Q96MX6 357 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 CINPQ9BW66 212 aaPredicted RBP13.22□□□□□ -0.29
SPG7-221ENST00000569720 SP110Q9HB58 689 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 GPATCH2LQ9NWQ4 482 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 IFNKQ9P0W0 207 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 KLQ9UEF7 1012 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 GPR34Q9UPC5 381 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 ATP8A1Q9Y2Q0 1164 aa13.22□□□□□ -0.29
SPG7-221ENST00000569720 MGAQ8IWI9 3026 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 CCDC187A0A096LP49 1063 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 CFAP69A5D8W1 941 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 GOLGA6L6A8MZA4 724 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 TMX2-CTNND1H3BSU7 103 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 CACNB4O00305 520 aaPredicted RBP13.21□□□□□ -0.29
SPG7-221ENST00000569720 PRPSAP2O60256 369 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 PCCBP05166 539 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 TPM1P09493 284 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 KELP23276 732 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 ZNF135P52742 658 aaPredicted RBP13.21□□□□□ -0.29
SPG7-221ENST00000569720 OGDHQ02218 1023 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 BCL2L1Q07817 233 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 MAMLD1Q13495 774 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 ALG11Q2TAA5 492 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 ARHGAP40Q5TG30 622 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 IRF2BP2Q7Z5L9 587 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 PCDH19Q8TAB3 1148 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 GFM1Q96RP9 751 aaKnown RBP13.21□□□□□ -0.29
SPG7-221ENST00000569720 SLC39A8Q9C0K1 460 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 CPNE5Q9HCH3 593 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 SIRPGQ9P1W8 387 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 PCSK1NQ9UHG2 260 aa13.21□□□□□ -0.29
SPG7-221ENST00000569720 DFFAO00273 331 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 CELA2BP08218 269 aaPredicted RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 ELFN1P0C7U0 828 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 RENBPP51606 427 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 IL10RBQ08334 325 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 VAC14Q08AM6 782 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 NSUN2Q08J23 767 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPG7-221ENST00000569720 RFTN1Q14699 578 aaPredicted RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 TCEA2Q15560 299 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 PPP6R3Q5H9R7 873 aaPredicted RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 SPECC1LQ69YQ0 1117 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 PLEKHA7Q6IQ23 1121 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 KYQ8NBH2 561 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 TSEN2Q8NCE0 465 aaKnown RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 CCDC74AQ96AQ1 378 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 WBP1Q96G27 269 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 LIN37Q96GY3 246 aaPredicted RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 KCTD15Q96SI1 283 aaPredicted RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 SNRNP25Q9BV90 132 aaKnown RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 XPO4Q9C0E2 1151 aaKnown RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 STRADBQ9C0K7 418 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 TAS2R14Q9NYV8 317 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
SPG7-221ENST00000569720 IMPACTQ9P2X3 320 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 OR1A2Q9Y585 309 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 UNC13CQ8NB66 2214 aa13.2□□□□□ -0.3
SPG7-221ENST00000569720 A0A1W2PQJ5 194 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 NTN3O00634 580 aaPredicted RBP13.19□□□□□ -0.3
SPG7-221ENST00000569720 ATMINO43313 823 aaPredicted RBP13.19□□□□□ -0.3
SPG7-221ENST00000569720 C1QL1O75973 258 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 RECQL5O94762 991 aaPredicted RBP13.19□□□□□ -0.3
SPG7-221ENST00000569720 TNFSF15O95150 251 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 PRKCGP05129 697 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 ERCC2P18074 760 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 NFKBIAP25963 317 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 PBX1P40424 430 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 SCNN1BP51168 640 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 ZNF75DP51815 510 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 KIAA1024LP59773 190 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 CFHR1Q03591 330 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 EIF3IQ13347 325 aaKnown RBP13.19□□□□□ -0.3
SPG7-221ENST00000569720 ASIC2Q16515 512 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 CA9Q16790 459 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 ZSWIM9Q86XI8 627 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
SPG7-221ENST00000569720 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 PRR11Q96HE9 360 aaPredicted RBP13.19□□□□□ -0.3
SPG7-221ENST00000569720 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.33e-6■■■□□ 16.8
SPG7-221ENST00000569720 EPB41L5Q9HCM4 733 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 DGKBQ9Y6T7 804 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 CFAP46Q8IYW2 2715 aa13.19□□□□□ -0.3
SPG7-221ENST00000569720 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.18□□□□□ -0.3
SPG7-221ENST00000569720 A0A1W2PNU3 283 aaPredicted RBP13.18□□□□□ -0.3
SPG7-221ENST00000569720 A0A1W2PQ67 120 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 TMEM191CA6NGB0 347 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 LRRC53A6NM62 1247 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms