RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 DUSP4Q13115 394 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 POLD3Q15054 466 aaPredicted RBP8.81□□□□□ -1
LINC00558-201ENST00000569422 RASIP1Q5U651 963 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 DCP1BQ8IZD4 617 aaKnown RBP8.81□□□□□ -1
LINC00558-201ENST00000569422 ACTRT2Q8TDY3 377 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 GDPD5Q8WTR4 605 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 SEMA3CQ99985 751 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 ECSITQ9BQ95 431 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 TRIM62Q9BVG3 475 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 GPR62Q9BZJ7 368 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 NCKIPSDQ9NZQ3 722 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 CCDC167Q9P0B6 97 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 MARCH2Q9P0N8 246 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 SCOCQ9UIL1 159 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 ANKRD6Q9Y2G4 727 aa8.81□□□□□ -1
LINC00558-201ENST00000569422 RALGAPA2Q2PPJ7 1873 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 UBA6A0AVT1 1052 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 FAM25EA8MYX2 175 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 C9JVG2 144 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 AP3B1O00203 1094 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 IFRD1O00458 451 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 RAMP2O60895 175 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 APOA4P06727 396 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 THRAP10827 490 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 CKBP12277 381 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 MYL4P12829 197 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 ALOX15P16050 662 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 GLDCP23378 1020 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 YWHAQP27348 245 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 ZNF135P52742 658 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 THOP1P52888 689 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 MRPS35P82673 323 aaKnown RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 FAM83EQ2M2I3 478 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 MMEL1Q495T6 779 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 SFT2D3Q587I9 215 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 MANEALQ5VSG8 457 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 DHDDSQ86SQ9 333 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 PAF1Q8N7H5 531 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 KYQ8NBH2 561 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 OR13C4Q8NGS5 318 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 PDCD6IPQ8WUM4 868 aaKnown RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 IFT43Q96FT9 208 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 GPR78Q96P69 363 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 RNF186Q9NXI6 227 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 C6orf203Q9P0P8 240 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 POLG2Q9UHN1 485 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 PCDHB5Q9Y5E4 795 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 A0A0D9SEW6 157 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 HEATR9A2RTY3 570 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 RGSL1A5PLK6 1076 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 LRRC14BA6NHZ5 514 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 GPC4O75487 556 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 ATP5BP06576 529 aaKnown RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 XRCC1P18887 633 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 CRABP2P29373 138 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 SOX11P35716 441 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 AQP4P55087 323 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 CDKN2DP55273 166 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 EIF4EBP2Q13542 120 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 MBTPS1Q14703 1052 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 SIRPB2Q5JXA9 342 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 HECTD2Q5U5R9 776 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 ARL6IP6Q8N6S5 226 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 C2CD4AQ8NCU7 369 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 NAT14Q8WUY8 206 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 DNAJC1Q96KC8 554 aaKnown RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 MCMBPQ9BTE3 642 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 SLC25A51Q9H1U9 297 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 PCDH10Q9P2E7 1040 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 GIMAP2Q9UG22 337 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 CORO1CQ9ULV4 474 aaPredicted RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 TLR6Q9Y2C9 796 aa8.8□□□□□ -1
LINC00558-201ENST00000569422 COPG1Q9Y678 874 aaKnown RBP8.8□□□□□ -1
LINC00558-201ENST00000569422 PPP6CO00743 305 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 SMIM24O75264 130 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 FKBP6O75344 327 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 SP100P23497 879 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 PPARGP37231 505 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 KCNC1P48547 511 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 SH3BGRP55822 239 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 TAGLNQ01995 201 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 ZNF235Q14590 738 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 SLC24A5Q71RS6 500 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 PGBD5Q8N414 524 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 OR13J1Q8NGT2 312 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 GLT1D1Q96MS3 346 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 ANKRD27Q96NW4 1050 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 GCNAQ96QF7 691 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 VCXQ9H320 206 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 FBRSL1Q9HCM7 1045 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 TRPC7Q9HCX4 862 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 TREX1Q9NSU2 369 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 FAM50BQ9Y247 325 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 PTGDR2Q9Y5Y4 395 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 NCF1BA6NI72 391 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 A8MT66 165 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 NCF1CA8MVU1 366 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 MUSKO15146 869 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms