RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 NDUFAF2Q8N183 169 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 PAF1Q8N7H5 531 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 TERB1Q8NA31 727 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 OR2A12Q8NGT7 310 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 UCMAQ8WVF2 138 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 SORCS1Q8WY21 1168 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 ALKBH8Q96BT7 664 aaKnown RBP12.67□□□□□ -0.38
GGA2-213ENST00000568922 FAM161BQ96MY7 647 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 AGAP2Q99490 1192 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 RPP25Q9BUL9 199 aaKnown RBP12.67□□□□□ -0.38
GGA2-213ENST00000568922 SUV39H2Q9H5I1 410 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 SSU72Q9NP77 194 aaKnown RBP12.67□□□□□ -0.38
GGA2-213ENST00000568922 SPO11Q9Y5K1 396 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 ARL5AQ9Y689 179 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 NUMBLQ9Y6R0 609 aa12.67□□□□□ -0.38
GGA2-213ENST00000568922 TTC34A8MYJ7 566 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 ARNTLO00327 626 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
GGA2-213ENST00000568922 RPP40O75818 363 aaKnown RBP12.66□□□□□ -0.38
GGA2-213ENST00000568922 LPOP22079 712 aaPredicted RBP12.66□□□□□ -0.38
GGA2-213ENST00000568922 PSMA3P25788 255 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
GGA2-213ENST00000568922 PRAMEP78395 509 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 SMAD1Q15797 465 aaKnown RBP12.66□□□□□ -0.38
GGA2-213ENST00000568922 UGP2Q16851 508 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 NEPROQ6NW34 567 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 TIFABQ6ZNK6 161 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 NUDT18Q6ZVK8 323 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 STRA8Q7Z7C7 330 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 MDGA1Q8NFP4 955 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 ECHDC3Q96DC8 303 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 RBBP8Q99708 897 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 HEPHQ9BQS7 1158 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 MFSD1Q9H3U5 465 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 ZDHHC6Q9H6R6 413 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 BRD9Q9H8M2 597 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
GGA2-213ENST00000568922 SLC17A6Q9P2U8 582 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 PHTF1Q9UMS5 762 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
GGA2-213ENST00000568922 PSAT1Q9Y617 370 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 LAMA3Q16787 3333 aa12.66□□□□□ -0.38
GGA2-213ENST00000568922 CDH23Q9H251 3354 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 A0A0J9YYE9 177 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 H3BQ06 376 aaPredicted RBP12.65□□□□□ -0.38
GGA2-213ENST00000568922 GOLGA8TH3BQL2 631 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 PRPF4O43172 522 aaKnown RBP eCLIP12.65□□□□□ -0.38
GGA2-213ENST00000568922 TRBC1P01850 177 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 ITGA2BP08514 1039 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 CREB1P16220 341 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 KRT4P19013 534 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 ABL2P42684 1182 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 ZNF140P52738 457 aaPredicted RBP12.65□□□□□ -0.38
GGA2-213ENST00000568922 LIMK2P53671 638 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 SLC18A1P54219 525 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 SMAD4Q13485 552 aaKnown RBP12.65□□□□□ -0.38
GGA2-213ENST00000568922 KIAA0408Q6ZU52 694 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 TTC8Q8TAM2 541 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 CSGALNACT1Q8TDX6 532 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 PTPRN2Q92932 1015 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 HDAC10Q969S8 669 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 VOPP1Q96AW1 172 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 LRIG1Q96JA1 1093 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 DNAJC1Q96KC8 554 aaKnown RBP12.65□□□□□ -0.38
GGA2-213ENST00000568922 OSBPL1AQ9BXW6 950 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 ZNF711Q9Y462 761 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 KCTD3Q9Y597 815 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 TICRRQ7Z2Z1 1910 aa12.65□□□□□ -0.38
GGA2-213ENST00000568922 TMEM120BA0PK00 339 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 HMX2A2RU54 273 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 TBC1D3BA6NDS4 549 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 GRXCR2A6NFK2 248 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 AURKAO14965 403 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 KAT7O95251 611 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 MDH1P40925 334 aaKnown RBP12.65□□□□□ -0.39
GGA2-213ENST00000568922 GRIA2P42262 883 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 POLR2LP62875 67 aaKnown RBP12.65□□□□□ -0.39
GGA2-213ENST00000568922 MESP2Q0VG99 397 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 BMPR2Q13873 1038 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 FNDC3BQ53EP0 1204 aaKnown RBP12.65□□□□□ -0.39
GGA2-213ENST00000568922 MROH9Q5TGP6 573 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 GDPD4Q6W3E5 623 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 GALNT7Q86SF2 657 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 C4orf33Q8N1A6 199 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 TTC30BQ8N4P2 665 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 CHST14Q8NCH0 376 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 C2CD4AQ8NCU7 369 aaPredicted RBP12.65□□□□□ -0.39
GGA2-213ENST00000568922 OR13C4Q8NGS5 318 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 OR6P1Q8NGX9 317 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 CDKN2AIPNLQ96HQ2 116 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 LRCH3Q96II8 777 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 SERAC1Q96JX3 654 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 TBATAQ96M53 351 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 C19orf43Q9BQ61 176 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 MCMBPQ9BTE3 642 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 CAPS2Q9BXY5 557 aa12.65□□□□□ -0.39
GGA2-213ENST00000568922 GGT7Q9UJ14 662 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms