RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CCND1P24385 295 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 PPM1AP35813 382 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 CPA2P48052 419 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 ARF5P84085 180 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 NSUN2Q08J23 767 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMPD3-211ENST00000568373 ARL13AQ5H913 290 aaPredicted RBP18.2■□□□□ 0.5
SMPD3-211ENST00000568373 MRNIPQ6NTE8 343 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 FBXO46Q6PJ61 603 aaPredicted RBP18.2■□□□□ 0.5
SMPD3-211ENST00000568373 SCG3Q8WXD2 468 aaKnown RBP18.2■□□□□ 0.5
SMPD3-211ENST00000568373 MOCOSQ96EN8 888 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 YME1L1Q96TA2 773 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 TDRD1Q9BXT4 1180 aaKnown RBP18.2■□□□□ 0.5
SMPD3-211ENST00000568373 B2RBV5 119 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 TBL1XO60907 577 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 LILRB3O75022 631 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 CRTAMO95727 393 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 OLFM2O95897 454 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 LTA4HP09960 611 aaKnown RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 MPSTP25325 297 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 HK2P52789 917 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 KDSRQ06136 332 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 PABPC1LQ4VXU2 614 aaKnown RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 TECRLQ5HYJ1 363 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 TMC7Q7Z402 723 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 RNF135Q8IUD6 432 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 GPR65Q8IYL9 337 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 ARL14EPQ8N8R7 260 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 ADAMTS19Q8TE59 1207 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 MCUR1Q96AQ8 359 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 UBXN10Q96LJ8 280 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 NUDCD1Q96RS6 583 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 ACSS2Q9NR19 701 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 KIAA1671Q9BY89 1806 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 TRIM43BA6NCK2 446 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 SPECC1L-ADORA2AF8WAN1 911 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 MATN2O00339 956 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 SCAMP3O14828 347 aaKnown RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 GREM1O60565 184 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 WISP3O95389 354 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 PIGNO95427 931 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 PRLP01236 227 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 CCDC166P0CW27 439 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 RPL14P50914 215 aaKnown RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 ZNF140P52738 457 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 CDKN2DP55273 166 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 PRKAA1Q13131 559 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 FSCBQ5H9T9 825 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 WASHC2DQ5SRD0 308 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 FAM45BPQ6NSW5 357 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 KLC3Q6P597 504 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 TXNDC5Q8NBS9 432 aaKnown RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 HJURPQ8NCD3 748 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 OR4L1Q8NH43 312 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 FAM45AQ8TCE6 357 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 AGR3Q8TD06 166 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 TRIM43Q96BQ3 446 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 RMDN1Q96DB5 314 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 MMADHCQ9H3L0 296 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 CORO1CQ9ULV4 474 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 SPO11Q9Y5K1 396 aa18.19■□□□□ 0.5
SMPD3-211ENST00000568373 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
SMPD3-211ENST00000568373 H0Y626 953 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 TMCC1O94876 653 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CD160O95971 181 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 SPATA31D3P0C874 917 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 HDCP19113 662 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 ATP5F1P24539 256 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 SLC26A3P40879 764 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CCR10P46092 362 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 DNAJB13P59910 316 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 ZXDBP98169 803 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CREMQ03060 361 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 TXNDC8Q6A555 127 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 Q6ZNB5 142 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 SPATA31D4Q6ZUB0 917 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CARNMT1Q8N4J0 409 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 MAPK15Q8TD08 544 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 PDCD6IPQ8WUM4 868 aaKnown RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CDKN2AIPNLQ96HQ2 116 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 PAWRQ96IZ0 340 aaKnown RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 DENND2DQ9H6A0 471 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 C11orf49Q9H6J7 331 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CATSPERZQ9NTU4 200 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 NLE1Q9NVX2 485 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CRYL1Q9Y2S2 319 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 CPQQ9Y646 472 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 ANKRD36A6QL64 1941 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 GFRA2O00451 464 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 HDAC3O15379 428 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 SNAP91O60641 907 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 ZMPSTE24O75844 475 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 ACRP10323 421 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 OGNP20774 298 aaKnown RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 MZF1P28698 734 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 SEMA3AQ14563 771 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 ACAP2Q15057 778 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 SLC9B1Q4ZJI4 515 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 LINGO4Q6UY18 593 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 PIWIL4Q7Z3Z4 852 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms