RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TP53INP2Q8IXH6 220 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 CACTIN-AS1Q8N1I8 211 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 BBS5Q8N3I7 341 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 ATPAF2Q8N5M1 289 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 TP53I13Q8NBR0 393 aaPredicted RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 OR8K1Q8NGG5 319 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 ZNF564Q8TBZ8 553 aaPredicted RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 MDM1Q8TC05 714 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 FAM71BQ8TC56 605 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 NSMCE1Q8WV22 266 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 CTNNBL1Q8WYA6 563 aaPredicted RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 ECHDC3Q96DC8 303 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 NXPE2Q96DL1 559 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 BTBD6Q96KE9 485 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 APOLD1Q96LR9 279 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 SLC13A1Q9BZW2 595 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 TSPY26PQ9H489 355 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 PCDH18Q9HCL0 1135 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 MBNL1Q9NR56 388 aaKnown RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 ETNK2Q9NVF9 386 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 ZNHIT6Q9NWK9 470 aaKnown RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 UVRAGQ9P2Y5 699 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 SPASTQ9UBP0 616 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 APOBEC3BQ9UH17 382 aaKnown RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 KLF15Q9UIH9 416 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 NENFQ9UMX5 172 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 CLCA2Q9UQC9 943 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 ATP8A1Q9Y2Q0 1164 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 GOLGA4Q13439 2230 aaKnown RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 SMG1Q96Q15 3661 aaKnown RBP4.82□□□□□ -1.64
CLK3-219ENST00000567805 IGF2RP11717 2491 aa4.82□□□□□ -1.64
CLK3-219ENST00000567805 ANKRD11Q6UB99 2663 aaPredicted RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 LY6G6EA0A0G2JKS1 128 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 SSU72P8A0A1W2PR75 194 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 LMO7DNF2Z398 122 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 TRAFD1O14545 582 aaPredicted RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 MUSKO15146 869 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 HTRA2O43464 458 aaPredicted RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 AKR1B10O60218 316 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 LZTS3O60299 673 aaPredicted RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 NEBLO76041 1014 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PROSCO94903 275 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PEX11BO96011 259 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 KRT7P08729 469 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 CD48P09326 243 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 TMEM253P0C7T8 217 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 CR2P20023 1033 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 IL4RP24394 825 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 HTR1BP28222 390 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 MAN1A1P33908 653 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 EIF4A3P38919 411 aaKnown RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 SSR1P43307 286 aaKnown RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 MMP13P45452 471 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 RPIAP49247 311 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 BLKP51451 505 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ARSEP51690 589 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PPARDQ03181 441 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 CYP4F3Q08477 520 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 GALNT2Q10471 571 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 RALGDSQ12967 914 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 TARDBPQ13148 414 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLK3-219ENST00000567805 MTM1Q13496 603 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 DPYSL3Q14195 570 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 INPP5AQ14642 412 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 NFATC4Q14934 902 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 RTP5Q14D33 572 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PAFAH1B3Q15102 231 aaKnown RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 PDK2Q15119 407 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 IRF4Q15306 451 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ASTE1Q2TB18 679 aaPredicted RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 WSCD2Q2TBF2 565 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ANKRD20A8PQ5CZ79 823 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PRRT3Q5FWE3 981 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 TPRG1LQ5T0D9 272 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 FAXCQ5TGI0 409 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 MARC1Q5VT66 337 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 TIGD7Q6NT04 549 aaPredicted RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 LIPIQ6XZB0 460 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 DPPA4Q7L190 304 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ZSWIM9Q86XI8 627 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 MARCH9Q86YJ5 346 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 MAP7D3Q8IWC1 876 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PHACTR4Q8IZ21 702 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 SDR16C5Q8N3Y7 309 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 TEX26Q8N6G2 289 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PAF1Q8N7H5 531 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 DCBLD1Q8N8Z6 715 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ATL2Q8NHH9 583 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 IFI44Q8TCB0 444 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 LMX1AQ8TE12 382 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 GLMNQ92990 594 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 FATE1Q969F0 183 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 NUDCD1Q96RS6 583 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 IL12RB2Q99665 862 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 MGME1Q9BQP7 344 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ZNF670Q9BS34 389 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 APOOQ9BUR5 198 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 LRRC61Q9BV99 259 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 BOCQ9BWV1 1114 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms