RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 BNC1Q01954 994 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 TRAF3Q13114 568 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 ARHGEF6Q15052 776 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 EFNB3Q15768 340 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 TCTN1Q2MV58 587 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 DCAF6Q58WW2 860 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 OTUD1Q5VV17 481 aaPredicted RBP4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 ZNF549Q6P9A3 640 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 LINGO2Q7L985 606 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 CPLX4Q7Z7G2 160 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 CCDC105Q8IYK2 499 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 MIGA1Q8NAN2 632 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 HUS1BQ8NHY5 278 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 NEK9Q8TD19 979 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 TRIB2Q92519 343 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 GTF3C6Q969F1 213 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 SLC41A2Q96JW4 573 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 SLITRK1Q96PX8 696 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 PRKRIP1Q9H875 184 aaPredicted RBP4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 CISD1Q9NZ45 108 aaKnown RBP4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 IL36RNQ9UBH0 155 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 PCDHA7Q9UN72 937 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 KCNE2Q9Y6J6 123 aa4.93□□□□□ -1.62
SHCBP1-206ENST00000567698 A0A1W2PRG0 241 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 LRRC53A6NM62 1247 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 VWA5AO00534 786 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 OAZ2O95190 189 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 FTCDO95954 541 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 SCGB1D1O95968 90 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 SPARCP09486 303 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 AMTP48728 403 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 ENTPD1P49961 510 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 NUDT6P53370 316 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 SETQ01105 290 aaPredicted RBP4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 CCNG2Q16589 344 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 MMEL1Q495T6 779 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 SLC45A4Q5BKX6 768 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 FSCBQ5H9T9 825 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM69BQ5VUD6 431 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 DAB2IPQ5VWQ8 1189 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 FOXRED2Q8IWF2 684 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 ZBTB2Q8N680 514 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 BEST2Q8NFU1 509 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 ZBTB9Q96C00 473 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM110AQ9BQ89 295 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 PDCL3Q9H2J4 239 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 OR6C3Q9NZP0 311 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 HAO1Q9UJM8 370 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 AGO1Q9UL18 857 aaKnown RBP4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 FZD10Q9ULW2 581 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 STON1Q9Y6Q2 735 aa4.92□□□□□ -1.62
SHCBP1-206ENST00000567698 A0A1B0GVM2 712 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 DYTNA2CJ06 578 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 CPED1A4D0V7 1026 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 LIPT2A6NK58 231 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 OR6C75A6NL08 312 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 HSPA12AO43301 675 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 CYC1P08574 325 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 HSPA1AP0DMV8 641 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 HSPA1BP0DMV9 641 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 LMO1P25800 156 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 HOXD3P31249 432 aaPredicted RBP4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 OLIG2Q13516 323 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 MED22Q15528 200 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 TTI2Q6NXR4 508 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 C8orf82Q6P1X6 216 aaPredicted RBP4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 NCEH1Q6PIU2 408 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 HAPLN4Q86UW8 402 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 ZCCHC9Q8N567 271 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 MIB2Q96AX9 1013 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM149B1Q96BN6 582 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 MRPL44Q9H9J2 332 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 KIF9Q9HAQ2 790 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 LIMA1Q9UHB6 759 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 CEPT1Q9Y6K0 416 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 UTYO14607 1347 aa4.91□□□□□ -1.62
SHCBP1-206ENST00000567698 FAM237AA0A1B0GTK4 181 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 FAM237BA0A1B0GVD1 139 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 TMEM202A6NGA9 273 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 ITM2AO43736 263 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 DOK2O60496 412 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 NDUFB4O95168 129 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 VNN2O95498 520 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 EIF2S1P05198 315 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 ITGB8P26012 769 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 HNRNPH1P31943 449 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 RARSP54136 660 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 BRWD1-AS2P59051 145 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 NANOS2P60321 138 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 CSTF3Q12996 717 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 EIF4A2Q14240 407 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 FRG1Q14331 258 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 USP41Q3LFD5 358 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 SETMARQ53H47 684 aaPredicted RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 TSSK4Q6SA08 328 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 SHFQ7M4L6 423 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 PALB2Q86YC2 1186 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 WDR63Q8IWG1 891 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 CLIP4Q8N3C7 705 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 USP6NLQ92738 828 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms