RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 DPPA4Q7L190 304 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 PAF1Q8N7H5 531 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 ATL2Q8NHH9 583 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 PCDH19Q8TAB3 1148 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 TSACCQ96A04 125 aaPredicted RBP15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 GRAMD1AQ96CP6 724 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 WDR92Q96MX6 357 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 ZNF599Q96NL3 588 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 PRORYQ9H606 182 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 KLQ9UEF7 1012 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 SEPT3Q9UH03 358 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 PADI4Q9UM07 663 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 DOLKQ9UPQ8 538 aa15.14■□□□□ 0.01
SCAMP2-209ENST00000567638 ARHGEF17Q96PE2 2063 aaPredicted RBP15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 SCN8AQ9UQD0 1980 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 A0A1W2PQJ5 194 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 RECQL5O94762 991 aaPredicted RBP15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 SCNN1BP51168 640 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 SRP54P61011 504 aaKnown RBP15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 SLC10A7Q0GE19 358 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 ZNF235Q14590 738 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 BOLA3Q53S33 107 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 C3orf38Q5JPI3 329 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 LVRNQ6Q4G3 990 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 TMCO3Q6UWJ1 677 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 NYAP1Q6ZVC0 841 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 RD3Q7Z3Z2 195 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 POLNQ7Z5Q5 900 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 SDR16C5Q8N3Y7 309 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 ARL10Q8N8L6 244 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 PLA2G15Q8NCC3 412 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 ZNF248Q8NDW4 579 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 WDR48Q8TAF3 677 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 SCG3Q8WXD2 468 aaKnown RBP15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 HSPH1Q92598 858 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 PDXPQ96GD0 296 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 ATXN7L3BQ96GX2 97 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 HIC2Q96JB3 615 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 NSMCE3Q96MG7 304 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 UBL7Q96S82 380 aaPredicted RBP15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 LGMNQ99538 433 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 CCDC3Q9BQI4 270 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 ASCL3Q9NQ33 180 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 ETNK2Q9NVF9 386 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 ENTPD2Q9Y5L3 495 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 RAI2Q9Y5P3 530 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 BAHCC1Q9P281 2608 aa15.13■□□□□ 0.01
SCAMP2-209ENST00000567638 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 PEX11BO96011 259 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 RARAP10276 462 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 GM2AP17900 193 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 AMPD1P23109 780 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 HSPA9P38646 679 aaKnown RBP15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 PBX1P40424 430 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 KIAA1024LP59773 190 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 ERVPABLB-1P60509 514 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 TLE3Q04726 772 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 PIGHQ14442 188 aaPredicted RBP15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 TCEA2Q15560 299 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 KCTD16Q68DU8 428 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 IGF2-ASQ6U949 168 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 GKN2Q86XP6 184 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 SPACA3Q8IXA5 215 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 NIPA2Q8N8Q9 360 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 KYQ8NBH2 561 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 TEKT4Q8WW24 435 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 SPOCK2Q92563 424 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 SYN2Q92777 582 aaPredicted RBP15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 FCRL3Q96P31 734 aaPredicted RBP15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 CSPG4P5Q96PW8 444 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 CBX8Q9HC52 389 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 SIRPGQ9P1W8 387 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 GULP1Q9UBP9 304 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 SATB2Q9UPW6 733 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 DGKBQ9Y6T7 804 aa15.12■□□□□ 0.01
SCAMP2-209ENST00000567638 LOC400499M0QZD8 3231 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 ZFC3H1O60293 1989 aaKnown RBP15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 UNC13CQ8NB66 2214 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 A0A1W2PNU3 283 aaPredicted RBP15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 A0A1W2PQ67 120 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 SYCE3A1L190 88 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 TTC24A2A3L6 582 aaPredicted RBP15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 CACNB4O00305 520 aaPredicted RBP15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 CASC3O15234 703 aaKnown RBP15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 HTRA2O43464 458 aaPredicted RBP15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 MAFKO60675 156 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 SOCS5O75159 536 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 TNFP01375 233 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 CR2P20023 1033 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 TPM4P67936 248 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 FANCCQ00597 558 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 SLC25A11Q02978 314 aaKnown RBP15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 SPIDRQ14159 915 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 TXNRD3NBQ6F5E7 133 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 LUZP1Q86V48 1076 aa15.11■□□□□ 0.01
SCAMP2-209ENST00000567638 PGBD5Q8N414 524 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms