RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 TCEAL2Q9H3H9 227 aaPredicted RBP9.28□□□□□ -0.92
CDH13-210ENST00000567445 MBNL1Q9NR56 388 aaKnown RBP9.28□□□□□ -0.92
CDH13-210ENST00000567445 ANO10Q9NW15 660 aa9.28□□□□□ -0.92
CDH13-210ENST00000567445 LHX3Q9UBR4 397 aa9.28□□□□□ -0.92
CDH13-210ENST00000567445 PNMA8BQ9ULN7 279 aaPredicted RBP9.28□□□□□ -0.92
CDH13-210ENST00000567445 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
CDH13-210ENST00000567445 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.93
CDH13-210ENST00000567445 TEX51A0A1B0GUA7 166 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 TMEM110-MUSTN1A8MSY1 372 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 LMO7DNF2Z398 122 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 MUSKO15146 869 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 INSIG1O15503 277 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 TCEA3O75764 348 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 PIGNO95427 931 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 ANXA6P08133 673 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 CCDC172P0C7W6 258 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 VSIG8P0DPA2 414 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 ITIH2P19823 946 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 XPAP23025 273 aaPredicted RBP9.27□□□□□ -0.93
CDH13-210ENST00000567445 HTR7P34969 479 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
CDH13-210ENST00000567445 PEX5P50542 639 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 ERVPABLB-1P60509 514 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 PPARDQ03181 441 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 C1orf61Q13536 156 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 GRM3Q14832 879 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 LRRC14Q15048 493 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 CYTH1Q15438 398 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 STX1AQ16623 288 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.27□□□□□ -0.93
CDH13-210ENST00000567445 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 TMEM52BQ4KMG9 183 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 FAXCQ5TGI0 409 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 ACAD10Q6JQN1 1059 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 DCUN1D2Q6PH85 259 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 SASS6Q6UVJ0 657 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 RBM44Q6ZP01 1051 aaKnown RBP9.27□□□□□ -0.93
CDH13-210ENST00000567445 DNAAF5Q86Y56 855 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 MCOLN2Q8IZK6 566 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 LSM14AQ8ND56 463 aaKnown RBP9.27□□□□□ -0.93
CDH13-210ENST00000567445 EXOC2Q96KP1 924 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 NCAPGQ9BPX3 1015 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 LRRC61Q9BV99 259 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 LRRC19Q9H756 370 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 THSD1Q9NS62 852 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 DONSONQ9NYP3 566 aa9.27□□□□□ -0.93
CDH13-210ENST00000567445 UBA2Q9UBT2 640 aaPredicted RBP9.27□□□□□ -0.93
CDH13-210ENST00000567445 TSPAN11A1L157 253 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 YY2O15391 372 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 TSHRP16473 764 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 FERP16591 822 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 BLKP51451 505 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 NDST2P52849 883 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 UCNP55089 124 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 TPI1P60174 286 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 CXADRP78310 365 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 OGDHQ02218 1023 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 C19orf57Q0VDD7 668 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 IRF4Q15306 451 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 ELOCQ15369 112 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 UGP2Q16851 508 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 WSCD2Q2TBF2 565 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 C3orf38Q5JPI3 329 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 PERM1Q5SV97 790 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 PPP1R2P3Q6NXS1 205 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 BRAT1Q6PJG6 821 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 IGF2-ASQ6U949 168 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 APTXQ7Z2E3 356 aaKnown RBP9.26□□□□□ -0.93
CDH13-210ENST00000567445 SLC35F3Q8IY50 421 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 FSTL5Q8N475 847 aaPredicted RBP9.26□□□□□ -0.93
CDH13-210ENST00000567445 NAT6Q93015 286 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 ATXN7L3BQ96GX2 97 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 NAF1Q96HR8 494 aaKnown RBP9.26□□□□□ -0.93
CDH13-210ENST00000567445 ZNF641Q96N77 438 aaPredicted RBP9.26□□□□□ -0.93
CDH13-210ENST00000567445 TUBGCP5Q96RT8 1024 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 HELZ2Q9BYK8 2649 aaKnown RBP9.26□□□□□ -0.93
CDH13-210ENST00000567445 CLPBQ9H078 707 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 HSD3B7Q9H2F3 369 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 SUV39H2Q9H5I1 410 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 PDFQ9HBH1 243 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 PCDH12Q9NPG4 1184 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 ASCL3Q9NQ33 180 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 PADI4Q9UM07 663 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 SATB2Q9UPW6 733 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 ENTPD2Q9Y5L3 495 aa9.26□□□□□ -0.93
CDH13-210ENST00000567445 COL27A1Q8IZC6 1860 aaPredicted RBP9.25□□□□□ -0.93
CDH13-210ENST00000567445 A0A1W2PNU3 283 aaPredicted RBP9.25□□□□□ -0.93
CDH13-210ENST00000567445 ARHGAP42A6NI28 874 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 EIF3CLB5ME19 914 aaKnown RBP9.25□□□□□ -0.93
CDH13-210ENST00000567445 J3KR12 359 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 BUB1BO60566 1050 aaPredicted RBP9.25□□□□□ -0.93
CDH13-210ENST00000567445 PRAMEF11O60813 436 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 PRB1P04280 392 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 ALPIP09923 528 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 C6P13671 934 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 TNFAIP3P21580 790 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 HTR1BP28222 390 aa9.25□□□□□ -0.93
CDH13-210ENST00000567445 RBMS1P29558 406 aaKnown RBP9.25□□□□□ -0.93
CDH13-210ENST00000567445 LIG3P49916 1009 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms