RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 RAPH1Q70E73 1250 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 MTDHQ86UE4 582 aaKnown RBP23.39■■□□□ 1.33
LINC00543-201ENST00000567234 ACVR1CQ8NER5 493 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 OR13J1Q8NGT2 312 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 SKA1Q96BD8 255 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 SPON2Q9BUD6 331 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 CINPQ9BW66 212 aaPredicted RBP23.39■■□□□ 1.33
LINC00543-201ENST00000567234 IL21Q9HBE4 155 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 NMRAL1Q9HBL8 299 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 NDUFA13Q9P0J0 144 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 HEY2Q9UBP5 337 aa23.39■■□□□ 1.33
LINC00543-201ENST00000567234 FAM95CA0A1B0GW59 222 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 ENTPD5O75356 428 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 H2AFYO75367 372 aaKnown RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 FGF18O76093 207 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 IRF1P10914 325 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 SLC1A6P48664 564 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 RAP1GDS1P52306 607 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 RAB10P61026 200 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 POU4F1Q01851 419 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 TBC1D25Q3MII6 688 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 ARID3BQ8IVW6 561 aaPredicted RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 TTC8Q8TAM2 541 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 PTCD3Q96EY7 689 aaKnown RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 NSL1Q96IY1 281 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 C1QTNF1Q9BXJ1 281 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 C20orf27Q9GZN8 174 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 MFSD1Q9H3U5 465 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 ZNF334Q9HCZ1 680 aaPredicted RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 ZNF358Q9NW07 568 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 ARIH1Q9Y4X5 557 aaPredicted RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 TTC24A2A3L6 582 aaPredicted RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 HGSO14964 777 aaPredicted RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 GSC2O15499 205 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 LDB2O43679 373 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 NDST3O95803 873 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 F7P08709 466 aaPredicted RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 RALBP11234 206 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 PIM1P11309 404 aaPredicted RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 STMN1P16949 149 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 LEPRP48357 1165 aaKnown RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 SGSHP51688 502 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 SMAD3P84022 425 aaKnown RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 IRF9Q00978 393 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 KHDC1Q4VXA5 237 aaKnown RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 ZCCHC23Q6ZST2 131 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 WBP2Q969T9 261 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 CENPKQ9BS16 269 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 CADM1Q9BY67 442 aaKnown RBP23.38■■□□□ 1.33
LINC00543-201ENST00000567234 WWP1Q9H0M0 922 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 ACOT9Q9Y305 439 aa23.38■■□□□ 1.33
LINC00543-201ENST00000567234 MAGEC1O60732 1142 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 HAUS5O94927 633 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 SLC35E2BP0CK96 405 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 CR2P20023 1033 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 PRKAA2P54646 552 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 HTRA4P83105 476 aaPredicted RBP23.37■■□□□ 1.33
LINC00543-201ENST00000567234 RCN1Q15293 331 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 CXorf57Q6NSI4 855 aaKnown RBP23.37■■□□□ 1.33
LINC00543-201ENST00000567234 PSRC1Q6PGN9 363 aaPredicted RBP23.37■■□□□ 1.33
LINC00543-201ENST00000567234 WDR75Q8IWA0 830 aaKnown RBP23.37■■□□□ 1.33
LINC00543-201ENST00000567234 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.37■■□□□ 1.33
LINC00543-201ENST00000567234 BRSK1Q8TDC3 778 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 TRIB3Q96RU7 358 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 FAM96AQ9H5X1 160 aa23.37■■□□□ 1.33
LINC00543-201ENST00000567234 STN1Q9H668 368 aaKnown RBP23.37■■□□□ 1.33
LINC00543-201ENST00000567234 G3V2L1 256 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 GFRA2O00451 464 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 CLCN5P51795 746 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 NSUN2Q08J23 767 aaKnown RBP eCLIP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 Q6ZNB5 142 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 SLC41A1Q8IVJ1 513 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 FAM217AQ8IXS0 508 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 HJURPQ8NCD3 748 aaPredicted RBP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 PIWIL2Q8TC59 973 aaKnown RBP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 PPP4R1Q8TF05 950 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 CEP290O15078 2479 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 A0A087X1B8 175 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 TYW5A2RUC4 315 aaKnown RBP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 INSIG1O15503 277 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 TSPAN3O60637 253 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 CNPP09543 421 aaKnown RBP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 HDCP19113 662 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 ZBTB16Q05516 673 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 SH2D4BQ5SQS7 431 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 RNF220Q5VTB9 566 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 RNF219Q5W0B1 726 aaPredicted RBP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 ADGRG6Q86SQ4 1221 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 FIBCD1Q8N539 461 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 ZNF395Q9H8N7 513 aaPredicted RBP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 TRPC7Q9HCX4 862 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 CHCHD3Q9NX63 227 aaKnown RBP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.36■■□□□ 1.33
LINC00543-201ENST00000567234 ATXN10Q9UBB4 475 aa23.36■■□□□ 1.33
LINC00543-201ENST00000567234 TMEM114B3SHH9 223 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 TGM5O43548 720 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 GREM1O60565 184 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 SERPINB3P29508 390 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 GMPRP36959 345 aa23.35■■□□□ 1.33
LINC00543-201ENST00000567234 ABCE1P61221 599 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms