RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SEC61BP60468 96 aaKnown RBP2.24□□□□□ -2.05
SMG1-212ENST00000566328 TBL3Q12788 808 aaKnown RBP2.24□□□□□ -2.05
SMG1-212ENST00000566328 GAGE5Q13069 117 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 GAGE6Q13070 117 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 PDCLQ13371 301 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 CTF1Q16619 201 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 SFMBT2Q5VUG0 894 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 SPINK14Q6IE38 97 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 IL20RBQ6UXL0 311 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 GFRALQ6UXV0 394 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 ZNF852Q6ZMS4 543 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 RASGRP2Q7LDG7 609 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 P2RY8Q86VZ1 359 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 TMEM219Q86XT9 240 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 LURAP1LQ8IV03 231 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 ODF3L1Q8IXM7 274 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 RNF113BQ8IZP6 322 aaKnown RBP2.24□□□□□ -2.05
SMG1-212ENST00000566328 SCAMP5Q8TAC9 235 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 BBS10Q8TAM1 723 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 HSPH1Q92598 858 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 LRR1Q96L50 414 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 TRAPPC9Q96Q05 1148 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 FSD1Q9BTV5 496 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 PABPC3Q9H361 631 aaKnown RBP2.24□□□□□ -2.05
SMG1-212ENST00000566328 TMEM30AQ9NV96 361 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 KCND3Q9UK17 655 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 AMDHD2Q9Y303 409 aa2.24□□□□□ -2.05
SMG1-212ENST00000566328 PDS5AQ29RF7 1337 aaKnown RBP2.23□□□□□ -2.05
SMG1-212ENST00000566328 GOLGA6L9A6NEM1 432 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 FAM90A20PA6NIJ5 464 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 HHLA1C9JL84 531 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 PSMD14O00487 310 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 SRD5A1P18405 259 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 RXRAP19793 462 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 NR1D1P20393 614 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 CLCNKAP51800 687 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 RBM5P52756 815 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMG1-212ENST00000566328 ITGADQ13349 1161 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 RUNX2Q13950 521 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 HLTFQ14527 1009 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMG1-212ENST00000566328 PAPPA-AS1Q5QFB9 102 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 PRSS45Q7RTY3 260 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 HERC6Q8IVU3 1022 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 WDR63Q8IWG1 891 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 FAM177A1Q8N128 213 aaPredicted RBP2.23□□□□□ -2.05
SMG1-212ENST00000566328 PARP16Q8N5Y8 322 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 ZNF527Q8NB42 609 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 ERGIC1Q969X5 290 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 LINC00479Q96M42 142 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 TRIM15Q9C019 465 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 CSTL1Q9H114 145 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 PLEKHA2Q9HB19 425 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 ARFGAP3Q9NP61 516 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 OBP2BQ9NPH6 170 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 ZDHHC18Q9NUE0 388 aa2.23□□□□□ -2.05
SMG1-212ENST00000566328 A0A0J9YWU9 116 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 LGALS16A8MUM7 142 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 SMIM1B2RUZ4 78 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 NR5A2O00482 541 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 ARHGEF9O43307 516 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 NBPF7P0C2Y1 421 aaPredicted RBP2.22□□□□□ -2.05
SMG1-212ENST00000566328 RRM1P23921 792 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 RYKP34925 604 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 KRT24Q2M2I5 525 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 SOWAHAQ2M3V2 549 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 EDRF1Q3B7T1 1238 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 ESCO2Q56NI9 601 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 PGBD2Q6P3X8 592 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 ATF7IPQ6VMQ6 1270 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 B3GNT6Q6ZMB0 384 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 DSELQ8IZU8 1212 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 SCCPDHQ8NBX0 429 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 AGBL3Q8NEM8 1001 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 GJC3Q8NFK1 279 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 WDR20Q8TBZ3 569 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 CSGALNACT1Q8TDX6 532 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 GDPD5Q8WTR4 605 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 SLC20A1Q8WUM9 679 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 TM9SF4Q92544 642 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 ABTB1Q969K4 478 aaPredicted RBP2.22□□□□□ -2.05
SMG1-212ENST00000566328 SH3KBP1Q96B97 665 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 ZNF689Q96CS4 500 aaPredicted RBP2.22□□□□□ -2.05
SMG1-212ENST00000566328 ZC3HAV1LQ96H79 300 aaKnown RBP2.22□□□□□ -2.05
SMG1-212ENST00000566328 ST6GAL2Q96JF0 529 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 TNIP3Q96KP6 325 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 OPRPNQ99935 248 aaPredicted RBP2.22□□□□□ -2.05
SMG1-212ENST00000566328 PDZD7Q9H5P4 517 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 TTC12Q9H892 705 aaPredicted RBP2.22□□□□□ -2.05
SMG1-212ENST00000566328 CNGB3Q9NQW8 809 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 CISD1Q9NZ45 108 aaKnown RBP2.22□□□□□ -2.05
SMG1-212ENST00000566328 HDAC6Q9UBN7 1215 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 PADI1Q9ULC6 663 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 NFE2L3Q9Y4A8 694 aa2.22□□□□□ -2.05
SMG1-212ENST00000566328 ARHGAP10A1A4S6 786 aa2.21□□□□□ -2.06
SMG1-212ENST00000566328 KRTAP16-1A8MUX0 517 aa2.21□□□□□ -2.06
SMG1-212ENST00000566328 E7EVH7 732 aa2.21□□□□□ -2.06
SMG1-212ENST00000566328 WDR1O75083 606 aa2.21□□□□□ -2.06
SMG1-212ENST00000566328 SKAP2O75563 359 aaPredicted RBP2.21□□□□□ -2.06
SMG1-212ENST00000566328 ITGA2P17301 1181 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms