RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 LIPIQ6XZB0 460 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 LRRC69Q6ZNQ3 347 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 HSPH1Q92598 858 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 BTBD6Q96KE9 485 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 ZNF599Q96NL3 588 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 CSPG4P5Q96PW8 444 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.42■□□□□ 0.54
USB1-213ENST00000566292 THAP2Q9H0W7 228 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.42■□□□□ 0.54
USB1-213ENST00000566292 SEPT3Q9UH03 358 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 RAI2Q9Y5P3 530 aa18.42■□□□□ 0.54
USB1-213ENST00000566292 BPTFQ12830 3046 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 A0A1W2PNU3 283 aaPredicted RBP18.41■□□□□ 0.54
USB1-213ENST00000566292 RRP8O43159 456 aaKnown RBP18.41■□□□□ 0.54
USB1-213ENST00000566292 RECQL5O94762 991 aaPredicted RBP18.41■□□□□ 0.54
USB1-213ENST00000566292 RASGRP1O95267 797 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 HTR1BP28222 390 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 ARL4AP40617 200 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 RPIAP49247 311 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 RENBPP51606 427 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 AP1S1P61966 158 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 SLC25A11Q02978 314 aaKnown RBP18.41■□□□□ 0.54
USB1-213ENST00000566292 DPPA4Q7L190 304 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 PGBD5Q8N414 524 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 FSTL5Q8N475 847 aaPredicted RBP18.41■□□□□ 0.54
USB1-213ENST00000566292 SYN2Q92777 582 aaPredicted RBP18.41■□□□□ 0.54
USB1-213ENST00000566292 GLMNQ92990 594 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 PADI4Q9UM07 663 aa18.41■□□□□ 0.54
USB1-213ENST00000566292 BZW2Q9Y6E2 419 aaKnown RBP18.41■□□□□ 0.54
USB1-213ENST00000566292 ARHGEF17Q96PE2 2063 aaPredicted RBP18.4■□□□□ 0.54
USB1-213ENST00000566292 A8MX80 341 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 MAFKO60675 156 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 DXOO77932 396 aaKnown RBP18.4■□□□□ 0.54
USB1-213ENST00000566292 ELFN1P0C7U0 828 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 CR2P20023 1033 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 LSSP48449 732 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 UBASH3AP57075 661 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 SRP54P61011 504 aaKnown RBP18.4■□□□□ 0.54
USB1-213ENST00000566292 CCDC173Q0VFZ6 552 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 PIGHQ14442 188 aaPredicted RBP18.4■□□□□ 0.54
USB1-213ENST00000566292 ELOCQ15369 112 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 TMCO3Q6UWJ1 677 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 RD3Q7Z3Z2 195 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 NIPA2Q8N8Q9 360 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 KYQ8NBH2 561 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 TPCN2Q8NHX9 752 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 PCDH19Q8TAB3 1148 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 PDXPQ96GD0 296 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 WDR92Q96MX6 357 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 ZNF578Q96N58 590 aaPredicted RBP18.4■□□□□ 0.54
USB1-213ENST00000566292 PRORYQ9H606 182 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 POLR1BQ9H9Y6 1135 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 PCDH18Q9HCL0 1135 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 KLQ9UEF7 1012 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 ENTPD2Q9Y5L3 495 aa18.4■□□□□ 0.54
USB1-213ENST00000566292 A0A087X0T9 212 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 HTRA2O43464 458 aaPredicted RBP18.39■□□□□ 0.53
USB1-213ENST00000566292 SERPING1P05155 500 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 CYP1A2P05177 515 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 ALPIP09923 528 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 FAM228BP0C875 321 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 CTSEP14091 401 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 KIAA1024LP59773 190 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 POLR2LP62875 67 aaKnown RBP18.39■□□□□ 0.53
USB1-213ENST00000566292 ZBED6P86452 979 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 ZNF235Q14590 738 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 ESRP1Q6NXG1 681 aaKnown RBP18.39■□□□□ 0.53
USB1-213ENST00000566292 LVRNQ6Q4G3 990 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 RBM44Q6ZP01 1051 aaKnown RBP18.39■□□□□ 0.53
USB1-213ENST00000566292 SPACA3Q8IXA5 215 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 PELI3Q8N2H9 469 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 PAF1Q8N7H5 531 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 CPLX3Q8WVH0 158 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 TEKT4Q8WW24 435 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 SPOCK2Q92563 424 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 NAT6Q93015 286 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 FUBP1Q96AE4 644 aaKnown RBP18.39■□□□□ 0.53
USB1-213ENST00000566292 ATXN7L3BQ96GX2 97 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 HIC2Q96JB3 615 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 CCDC3Q9BQI4 270 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 NUP85Q9BW27 656 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 ASCL3Q9NQ33 180 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 SIRPGQ9P1W8 387 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 GULP1Q9UBP9 304 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 B4GALT6Q9UBX8 382 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 ANAPC7Q9UJX3 599 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 CAPN11Q9UMQ6 739 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 DOLKQ9UPQ8 538 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 PCDHGC4Q9Y5F7 938 aa18.39■□□□□ 0.53
USB1-213ENST00000566292 UNC13CQ8NB66 2214 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.38■□□□□ 0.53
USB1-213ENST00000566292 TMEM202A6NGA9 273 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 TCEA3O75764 348 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 HSPA9P38646 679 aaKnown RBP18.38■□□□□ 0.53
USB1-213ENST00000566292 PDX1P52945 283 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 TPM4P67936 248 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 TLE3Q04726 772 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 C3orf38Q5JPI3 329 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 LSMEM2Q8N112 164 aa18.38■□□□□ 0.53
USB1-213ENST00000566292 SDR16C5Q8N3Y7 309 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms