RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 CT47A1Q5JQC4 288 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CCDC183Q5T5S1 534 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 IZUMO3Q5VZ72 239 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 PDPK2PQ6A1A2 396 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 IGFL2Q6UWQ7 119 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 TRIM59Q8IWR1 403 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 ATP11CQ8NB49 1132 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 ADAMTS17Q8TE56 1095 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CCDC74BQ96LY2 380 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 MCCC1Q96RQ3 725 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CD180Q99467 661 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 GDPD2Q9HCC8 539 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CNOT1A5YKK6 2376 aaKnown RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 NUMA1Q14980 2115 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 KIR2DS5A0A0G2JLQ3 304 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 A0A0G2JNG1 304 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 IGLON5A6NGN9 336 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 KIR2DS3K7RE56 304 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 RNF225M0QZC1 329 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CACNB4O00305 520 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 INPP4BO15327 924 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 HTRA2O43464 458 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 KRT38O76015 456 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 LCP1P13796 627 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 VAV1P15498 845 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CD58P19256 250 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CES1P23141 567 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 RENBPP51606 427 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 HDAC4P56524 1084 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 PER3P56645 1201 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 POLR2LP62875 67 aaKnown RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 KIR2DS5Q14953 304 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 C16orf72Q14CZ0 275 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 B3GNTL1Q67FW5 361 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 ERAP2Q6P179 960 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 ZFAND4Q86XD8 727 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 CHST14Q8NCH0 376 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 ST6GALNAC3Q8NDV1 305 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 PKNOX2Q96KN3 472 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 NCAPGQ9BPX3 1015 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 BRD8Q9H0E9 1235 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.16□□□□□ -1.424e-9■■■■□ 20.3
UBE3A-205ENST00000566215 LHX3Q9UBR4 397 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 ARMCX3Q9UH62 379 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-205ENST00000566215 SLC5A6Q9Y289 635 aa6.16□□□□□ -1.42
UBE3A-205ENST00000566215 IPO13O94829 963 aaKnown RBP6.15□□□□□ -1.42
UBE3A-205ENST00000566215 AP1S1P61966 158 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.15□□□□□ -1.42
UBE3A-205ENST00000566215 WSCD2Q2TBF2 565 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 WDTC1Q8N5D0 677 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 RNF214Q8ND24 703 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 ZNF606Q8WXB4 792 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 RPRD1AQ96P16 312 aaPredicted RBP6.15□□□□□ -1.42
UBE3A-205ENST00000566215 LYSMD1Q96S90 227 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 STIM2Q9P246 746 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 LRIT1Q9P2V4 623 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 PISDQ9UG56 409 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 ATP6V1DQ9Y5K8 247 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 TRPM6Q9BX84 2022 aa6.15□□□□□ -1.42
UBE3A-205ENST00000566215 CPED1A4D0V7 1026 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 SLC31A1O15431 190 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 HNRNPRO43390 633 aaKnown RBP6.15□□□□□ -1.43
UBE3A-205ENST00000566215 COPB1P53618 953 aaKnown RBP6.15□□□□□ -1.43
UBE3A-205ENST00000566215 CLDN2P57739 230 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 RPL26P61254 145 aaKnown RBP6.15□□□□□ -1.43
UBE3A-205ENST00000566215 ART3Q13508 389 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 PRRT3Q5FWE3 981 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 CEP135Q66GS9 1140 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 MSANTD4Q8NCY6 345 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 PCDH19Q8TAB3 1148 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 C14orf79Q96F83 325 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 PPP1R13BQ96KQ4 1090 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 SEMA6CQ9H3T2 930 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 FAM204AQ9H8W3 233 aa6.15□□□□□ -1.43
UBE3A-205ENST00000566215 RPL26L1Q9UNX3 145 aaKnown RBP6.15□□□□□ -1.43
UBE3A-205ENST00000566215 A0A1W2PQ72 361 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PRSS38A1L453 326 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 KPNA3O00505 521 aaPredicted RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 DUX1O43812 170 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 VPS4BO75351 444 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PCDH8O95206 1070 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 ZRANB2O95218 330 aaKnown RBP eCLIP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 FGFR1OPO95684 399 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 JCHAINP01591 159 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 TRIM49P0CI25 452 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 TRIM49CP0CI26 452 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 ZNF30P17039 623 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 XRCC1P18887 633 aaPredicted RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 HADHAP40939 763 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 GARSP41250 739 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 FOXM1Q08050 763 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 ZNF235Q14590 738 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PNCKQ6P2M8 343 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 LRRC49Q8IUZ0 686 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 SFRP1Q8N474 314 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 RPL10LQ96L21 214 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 MUC3BQ9H195 1237 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PDCL3Q9H2J4 239 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 SERTAD1Q9UHV2 236 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms