RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	PGBD5	Q8N414	524 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	FSTL5	Q8N475	847 aa	Predicted RBP	11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	IFI44	Q8TCB0	444 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	HSPH1	Q92598	858 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	BTBD6	Q96KE9	485 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	IL12RB2	Q99665	862 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	MGME1	Q9BQP7	344 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	APOO	Q9BUR5	198 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	SLC13A1	Q9BZW2	595 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	IFNK	Q9P0W0	207 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	ATM	Q13315	3056 aa		11.71	□□□□□ -0.54
KIFC3-222	ENST00000565481	GCN1	Q92616	2671 aa	Known RBP	11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481		A0A1W2PQ67	120 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	YY2	O15391	372 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	BRINP1	O60477	761 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	HOXC4	P09017	264 aa	Predicted RBP	11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	TSHR	P16473	764 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	PTMS	P20962	102 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	CASP14	P31944	242 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	SERPINB6	P35237	376 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	TRIM23	P36406	574 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	EIF2S3	P41091	472 aa	Known RBP	11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	ADK	P55263	362 aa	Known RBP	11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	KIAA1024L	P59773	190 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	SEMG2	Q02383	582 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	C1orf61	Q13536	156 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	NR0B2	Q15466	257 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	CDKN3	Q16667	212 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	ALG11	Q2TAA5	492 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	ZSCAN23	Q3MJ62	389 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	RALGPS1	Q5JS13	557 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	FAXC	Q5TGI0	409 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	GUSBP11	Q6P575	273 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	LVRN	Q6Q4G3	990 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	PDZD3	Q86UT5	571 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	LRRC49	Q8IUZ0	686 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	SLC35F3	Q8IY50	421 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	CBARP	Q8N350	705 aa	Predicted RBP	11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	SDR16C5	Q8N3Y7	309 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	TPCN2	Q8NHX9	752 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	MAPK15	Q8TD08	544 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	CPLX3	Q8WVH0	158 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	DEPDC7	Q96QD5	511 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	NUDCD1	Q96RS6	583 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	PCDHB1	Q9Y5F3	818 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	AK5	Q9Y6K8	562 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	DGKB	Q9Y6T7	804 aa		11.7	□□□□□ -0.54
KIFC3-222	ENST00000565481	HELZ2	Q9BYK8	2649 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	MYO1F	O00160	1098 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	CS	O75390	466 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	DXO	O77932	396 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	RECQL5	O94762	991 aa	Predicted RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	RASGRP1	O95267	797 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ANXA6	P08133	673 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	CELA2B	P08218	269 aa	Predicted RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ELFN1	P0C7U0	828 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	TGM2	P21980	687 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	HTR1B	P28222	390 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	RPIA	P49247	311 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	CDH6	P55285	790 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	SRP54	P61011	504 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ZNF235	Q14590	738 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ELOC	Q15369	112 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ASTE1	Q2TB18	679 aa	Predicted RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	TBC1D25	Q3MII6	688 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	PERM1	Q5SV97	790 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	CCDC122	Q5T0U0	273 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	KCTD16	Q68DU8	428 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ESRP1	Q6NXG1	681 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	NYAP1	Q6ZVC0	841 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	HID1	Q8IV36	788 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ATPAF2	Q8N5M1	289 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	TEX26	Q8N6G2	289 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	PLA2G15	Q8NCC3	412 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ATL2	Q8NHH9	583 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	FGF11	Q92914	225 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	GLMN	Q92990	594 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	NAT6	Q93015	286 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	TSACC	Q96A04	125 aa	Predicted RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	FUBP1	Q96AE4	644 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	GRAMD1A	Q96CP6	724 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	COQ10A	Q96MF6	247 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	WDR92	Q96MX6	357 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	DNAJC7	Q99615	494 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	XPO4	Q9C0E2	1151 aa	Known RBP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	NOD2	Q9HC29	1040 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	UVRAG	Q9P2Y5	699 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	B4GALT6	Q9UBX8	382 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	OR1A2	Q9Y585	309 aa		11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
KIFC3-222	ENST00000565481	TTC24	A2A3L6	582 aa	Predicted RBP	11.68	□□□□□ -0.54
KIFC3-222	ENST00000565481	CPED1	A4D0V7	1026 aa		11.68	□□□□□ -0.54
KIFC3-222	ENST00000565481	TNFRSF10C	O14798	259 aa		11.68	□□□□□ -0.54
KIFC3-222	ENST00000565481	MFSD11	O43934	449 aa		11.68	□□□□□ -0.54
KIFC3-222	ENST00000565481	TCEA3	O75764	348 aa		11.68	□□□□□ -0.54
KIFC3-222	ENST00000565481	PROSC	O94903	275 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms