RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CDH6P55285 790 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 PCBP4P57723 403 aaKnown RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 ERVPABLB-1P60509 514 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 MAXP61244 160 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 AP1S1P61966 158 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 CXADRP78310 365 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 ZBED6P86452 979 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 BIRC2Q13490 618 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 MTM1Q13496 603 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 ARHGEF7Q14155 803 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 SPIDRQ14159 915 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 NFATC4Q14934 902 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 AGERQ15109 404 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 TSR1Q2NL82 804 aaKnown RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 FIGNQ5HY92 759 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 C3orf38Q5JPI3 329 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 TMCO4Q5TGY1 634 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 E4F1Q66K89 784 aaPredicted RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 PNCKQ6P2M8 343 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 ALKBH5Q6P6C2 394 aaKnown RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 NYAP1Q6ZVC0 841 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 GPR155Q7Z3F1 870 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 POLNQ7Z5Q5 900 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 ZSWIM9Q86XI8 627 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 SLC35F3Q8IY50 421 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 NDUFAF2Q8N183 169 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 SDR16C5Q8N3Y7 309 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 NPWQ8N729 165 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 WDR48Q8TAF3 677 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 SYN2Q92777 582 aaPredicted RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 GRAMD1AQ96CP6 724 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 TBATAQ96M53 351 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 FCRL3Q96P31 734 aaPredicted RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 CSPG4P5Q96PW8 444 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 PSKH2Q96QS6 385 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 GFM1Q96RP9 751 aaKnown RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 NUDCD1Q96RS6 583 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 NUP85Q9BW27 656 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 BOCQ9BWV1 1114 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 LGR4Q9BXB1 951 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 NOD2Q9HC29 1040 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 EPB41L5Q9HCM4 733 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 CYP4F12Q9HCS2 524 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 MRPL40Q9NQ50 206 aaKnown RBP6.44□□□□□ -1.38
TCF4-228ENST00000565393 THSD1Q9NS62 852 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 ETNK2Q9NVF9 386 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 GOLGA6AQ9NYA3 693 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 IFNKQ9P0W0 207 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 ANAPC7Q9UJX3 599 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 CAPN11Q9UMQ6 739 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 PHTF1Q9UMS5 762 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 SATB2Q9UPW6 733 aa6.44□□□□□ -1.38
TCF4-228ENST00000565393 DMXL1Q9Y485 3027 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 TCEA3O75764 348 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 TNFSF15O95150 251 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 CPP00450 1065 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 CYP1A2P05177 515 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 RPLP0P05388 317 aaKnown RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 CYP2A6P11509 494 aaPredicted RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 CTPS1P17812 591 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 ALDH4A1P30038 563 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 CASP14P31944 242 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 VIPR1P32241 457 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 SERPINB6P35237 376 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 GJC1P36383 396 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 TRIM23P36406 574 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 HSPA9P38646 679 aaKnown RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 MMP13P45452 471 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 INHBCP55103 352 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 CCL7P80098 99 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 RALGDSQ12967 914 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 MMRN1Q13201 1228 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 DPYSQ14117 519 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 PTPRRQ15256 657 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 DPYSL2Q16555 572 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 ARMC12Q5T9G4 340 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 ARHGAP40Q5TG30 622 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 HGSNATQ68CP4 663 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 TXNRD3NBQ6F5E7 133 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 CYP4V2Q6ZWL3 525 aaPredicted RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 DPPA4Q7L190 304 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 JAMLQ86YT9 394 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 MAP7D3Q8IWC1 876 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 SPACA3Q8IXA5 215 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 PGBD5Q8N414 524 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 FBXO39Q8N4B4 442 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 ARL14Q8N4G2 192 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 ATPAF2Q8N5M1 289 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 ARL10Q8N8L6 244 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 CCNYQ8ND76 341 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 OR6C4Q8NGE1 309 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 WDR36Q8NI36 951 aaKnown RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 PCDH19Q8TAB3 1148 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 SNIP1Q8TAD8 396 aaKnown RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 TEKT4Q8WW24 435 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 KCNE4Q8WWG9 221 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 OR1E3Q8WZA6 343 aa6.43□□□□□ -1.38
TCF4-228ENST00000565393 FUBP1Q96AE4 644 aaKnown RBP6.43□□□□□ -1.38
TCF4-228ENST00000565393 CCDC74AQ96AQ1 378 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms