RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 AGERQ15109 404 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 ERAP2Q6P179 960 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 CRTC1Q6UUV9 634 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 RBM44Q6ZP01 1051 aaKnown RBP18.62■□□□□ 0.57
CLN6-204ENST00000564752 CAMK1DQ8IU85 385 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 FSTL5Q8N475 847 aaPredicted RBP18.62■□□□□ 0.57
CLN6-204ENST00000564752 SLC39A7Q92504 469 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 HSPH1Q92598 858 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 NAT6Q93015 286 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 ATXN7L3BQ96GX2 97 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 NAF1Q96HR8 494 aaKnown RBP18.62■□□□□ 0.57
CLN6-204ENST00000564752 BTBD6Q96KE9 485 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 TUBGCP5Q96RT8 1024 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 SP110Q9HB58 689 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLN6-204ENST00000564752 PADI4Q9UM07 663 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 ENTPD2Q9Y5L3 495 aa18.62■□□□□ 0.57
CLN6-204ENST00000564752 TEX51A0A1B0GUA7 166 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 DFFAO00273 331 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 CELA2BP08218 269 aaPredicted RBP18.61■□□□□ 0.57
CLN6-204ENST00000564752 TPM1P09493 284 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 TCF4P15884 667 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 MMP12P39900 470 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 RGRP47804 291 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 HCAR3P49019 387 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 LIG3P49916 1009 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 CXADRP78310 365 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 DPYSQ14117 519 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 INPP5AQ14642 412 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 ELOCQ15369 112 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 DPYSL2Q16555 572 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 BOLA3Q53S33 107 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 AFMIDQ63HM1 303 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 ESRP1Q6NXG1 681 aaKnown RBP18.61■□□□□ 0.57
CLN6-204ENST00000564752 LVRNQ6Q4G3 990 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 SRLQ86TD4 932 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 ZSWIM9Q86XI8 627 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 HID1Q8IV36 788 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 NPWQ8N729 165 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 NIPA2Q8N8Q9 360 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 WDR48Q8TAF3 677 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 TSACCQ96A04 125 aaPredicted RBP18.61■□□□□ 0.57
CLN6-204ENST00000564752 SLC46A1Q96NT5 459 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 APOOQ9BUR5 198 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 DEF6Q9H4E7 631 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 THSD1Q9NS62 852 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 CWC15Q9P013 229 aaKnown RBP18.61■□□□□ 0.57
CLN6-204ENST00000564752 SATB2Q9UPW6 733 aa18.61■□□□□ 0.57
CLN6-204ENST00000564752 CFAP69A5D8W1 941 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 CASC3O15234 703 aaKnown RBP18.6■□□□□ 0.57
CLN6-204ENST00000564752 PALMO75781 387 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 HTR1BP28222 390 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 C19orf57Q0VDD7 668 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 NFATC4Q14934 902 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 ALG11Q2TAA5 492 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 C3orf38Q5JPI3 329 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 ENPP7Q6UWV6 458 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 ARHGAP12Q8IWW6 846 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 SDR16C5Q8N3Y7 309 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 TSEN2Q8NCE0 465 aaKnown RBP18.6■□□□□ 0.57
CLN6-204ENST00000564752 OR8K1Q8NGG5 319 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 ZNF564Q8TBZ8 553 aaPredicted RBP18.6■□□□□ 0.57
CLN6-204ENST00000564752 TEKT4Q8WW24 435 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 SCG3Q8WXD2 468 aaKnown RBP18.6■□□□□ 0.57
CLN6-204ENST00000564752 PRR11Q96HE9 360 aaPredicted RBP18.6■□□□□ 0.57
CLN6-204ENST00000564752 CCDC3Q9BQI4 270 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 ZNHIT6Q9NWK9 470 aaKnown RBP18.6■□□□□ 0.57
CLN6-204ENST00000564752 DOLKQ9UPQ8 538 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 ATP8A1Q9Y2Q0 1164 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 PCDHGA8Q9Y5G5 932 aa18.6■□□□□ 0.57
CLN6-204ENST00000564752 SETXQ7Z333 2677 aaKnown RBP18.6■□□□□ 0.57
CLN6-204ENST00000564752 ANKRD36A6QL64 1941 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 MYO1FO00160 1098 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 RASGRP1O95267 797 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 PRKCGP05129 697 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 ALPIP09923 528 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 RARAP10276 462 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 CTSEP14091 401 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 RBMS1P29558 406 aaKnown RBP18.59■□□□□ 0.57
CLN6-204ENST00000564752 SSR1P43307 286 aaKnown RBP18.59■□□□□ 0.57
CLN6-204ENST00000564752 SRP54P61011 504 aaKnown RBP18.59■□□□□ 0.57
CLN6-204ENST00000564752 NSUN2Q08J23 767 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLN6-204ENST00000564752 SLC18A3Q16572 532 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 TSR1Q2NL82 804 aaKnown RBP18.59■□□□□ 0.57
CLN6-204ENST00000564752 CFAP58Q5T655 872 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 BROXQ5VW32 411 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 TMCO3Q6UWJ1 677 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 VSTM4Q8IW00 320 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 LZTR1Q8N653 840 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 ARL10Q8N8L6 244 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 KCNE4Q8WWG9 221 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 CTNNBL1Q8WYA6 563 aaPredicted RBP18.59■□□□□ 0.57
CLN6-204ENST00000564752 DNAJC7Q99615 494 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 CINPQ9BW66 212 aaPredicted RBP18.59■□□□□ 0.57
CLN6-204ENST00000564752 DPH1Q9BZG8 443 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 ATP13A3Q9H7F0 1226 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 GULP1Q9UBP9 304 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 NENFQ9UMX5 172 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 OR1A2Q9Y585 309 aa18.59■□□□□ 0.57
CLN6-204ENST00000564752 NTN3O00634 580 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms