RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 MAFKO60675 156 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 RNASEH1O60930 286 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 USP12O75317 370 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 DUSP11O75319 330 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 MATN4O95460 622 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 IGLV3-25P01717 112 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 PRKCGP05129 697 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 SERPINF2P08697 491 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 COL6A1P12109 1028 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 BMP2P12643 396 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ZNF23P17027 643 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 CD9P21926 228 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 CDC25CP30307 473 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 HOXC8P31273 242 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 GRIK1P39086 918 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 SLC1A2P43004 574 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 MAGEA11P43364 429 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ARCN1P48444 511 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 THOP1P52888 689 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 MLLT6P55198 1093 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 NME5P56597 212 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 WNT3AP56704 352 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 KCNK10P57789 538 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 INHBEP58166 350 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 HERVK_113P63132 956 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 RAD51Q06609 339 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ITKQ08881 620 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 TMEM62Q0P6H9 643 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 MAD2L1Q13257 205 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 CSHL1Q14406 222 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 POU6F1Q14863 301 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 FSCN1Q16658 493 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 LRRC36Q1X8D7 754 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 KIF19Q2TAC6 998 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 KCTD21Q4G0X4 260 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 AGKQ53H12 422 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 TMTC4Q5T4D3 741 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 VWA5B1Q5TIE3 1220 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 OTUD1Q5VV17 481 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 LPCAT4Q643R3 524 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 MSANTD2Q6P1R3 559 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 LYPD8Q6UX82 237 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ZBTB49Q6ZSB9 765 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 PAQR9Q6ZVX9 377 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 DEFB132Q7Z7B7 95 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ZNF354CQ86Y25 554 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 KBTBD2Q8IY47 623 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 TBC1D21Q8IYX1 336 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 PLD6Q8N2A8 252 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 PELI3Q8N2H9 469 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 STK40Q8N2I9 435 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ANKFN1Q8N957 763 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ARRDC4Q8NCT1 418 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 TSPAN14Q8NG11 270 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 GIPC2Q8TF65 315 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 C2orf15Q8WU43 125 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 HEXDCQ8WVB3 486 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 OSCP1Q8WVF1 389 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 SDCCAG3Q96C92 435 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 NXNL1Q96CM4 212 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 IMP4Q96G21 291 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 FEM1CQ96JP0 617 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 BTN2A3PQ96KV6 586 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 SUSD3Q96L08 255 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 FCRL2Q96LA5 508 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 C8orf48Q96LL4 319 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ZNF597Q96LX8 424 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 PRICKLE1Q96MT3 831 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 BIRC8Q96P09 236 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 GCNAQ96QF7 691 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 UHRF1Q96T88 793 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 NDNQ99608 321 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 SH3GL1Q99961 368 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 DDX50Q9BQ39 737 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ERVK-6Q9BXR3 956 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 CEP41Q9BYV8 373 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 SIK2Q9H0K1 926 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 COPS7BQ9H9Q2 264 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 CAB39LQ9H9S4 337 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 CLK4Q9HAZ1 481 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 MAGEE1Q9HCI5 957 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 MAN1C1Q9NR34 630 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 TMEM248Q9NWD8 314 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 TAS2R13Q9NYV9 303 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 PKD2L2Q9NZM6 624 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 RIMS3Q9UJD0 308 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 PCDHB3Q9Y5E6 796 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 TNPO3Q9Y5L0 923 aaKnown RBP7.66□□□□□ -1.18
ATXN3-249ENST00000564606 ZNF236Q9UL36 1845 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 EVPLQ92817 2033 aa7.66□□□□□ -1.18
ATXN3-249ENST00000564606 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-249ENST00000564606 TCRBV3S1A0A5B6 114 aa7.65□□□□□ -1.18
ATXN3-249ENST00000564606 ANKRD33BA6NCL7 494 aa7.65□□□□□ -1.18
ATXN3-249ENST00000564606 ARL5CA6NH57 179 aa7.65□□□□□ -1.18
ATXN3-249ENST00000564606 CAPN8A6NHC0 703 aa7.65□□□□□ -1.18
ATXN3-249ENST00000564606 C2orf81A6NN90 581 aa7.65□□□□□ -1.18
ATXN3-249ENST00000564606 C16orf96A6NNT2 1141 aa7.65□□□□□ -1.18
ATXN3-249ENST00000564606 KCNU1A8MYU2 1149 aa7.65□□□□□ -1.18
ATXN3-249ENST00000564606 FAM155AB1AL88 458 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-249ENST00000564606 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms