RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
UBR1-205ENST00000564540 SORCS1Q8WY21 1168 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 RND1Q92730 232 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 MPHOSPH8Q99549 860 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 C20orf141Q9NUB4 165 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 RRN3Q9NYV6 651 aa4.86□□□□□ -1.63
UBR1-205ENST00000564540 SOCS6O14544 535 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 HNRNPA1P09651 372 aaKnown RBP eCLIP4.85□□□□□ -1.63
UBR1-205ENST00000564540 LINC00271P0C7V0 271 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 AGAP20933 346 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 EIF2S3P41091 472 aaKnown RBP4.85□□□□□ -1.63
UBR1-205ENST00000564540 POU3F1Q03052 451 aaPredicted RBP4.85□□□□□ -1.63
UBR1-205ENST00000564540 WDR73Q6P4I2 378 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 FBXO46Q6PJ61 603 aaPredicted RBP4.85□□□□□ -1.63
UBR1-205ENST00000564540 TDRPQ86YL5 185 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 ZNF441Q8N8Z8 693 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 C11orf65Q8NCR3 313 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 FBXL8Q96CD0 374 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 ZNF385AQ96PM9 386 aaKnown RBP4.85□□□□□ -1.63
UBR1-205ENST00000564540 SMARCAL1Q9NZC9 954 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 LUZP4Q9P127 313 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 MDFICQ9P1T7 246 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
UBR1-205ENST00000564540 KCNS2Q9ULS6 477 aa4.85□□□□□ -1.63
UBR1-205ENST00000564540 LSM4Q9Y4Z0 139 aaKnown RBP4.85□□□□□ -1.63
UBR1-205ENST00000564540 HNRNPCL2B2RXH8 293 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 F7P08709 466 aaPredicted RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 IFIT1P09914 478 aaKnown RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 GPTP24298 496 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 STX2P32856 288 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 NLRP5P59047 1200 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 UFM1P61960 85 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 ZNF155Q12901 538 aaPredicted RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 NEDD9Q14511 834 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 PPP2R5BQ15173 497 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 OASLQ15646 514 aaKnown RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 ZRSR1Q15695 479 aaKnown RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 SGO1Q5FBB7 561 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 HIST2H2BDQ6DRA6 164 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 USP43Q70EL4 1123 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 MTSS1LQ765P7 747 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 SLC35F3Q8IY50 421 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 MUC20Q8N307 709 aaPredicted RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 POC1AQ8NBT0 407 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 SCCPDHQ8NBX0 429 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 AGBL3Q8NEM8 1001 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 SPATA22Q8NHS9 363 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 TANKQ92844 425 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 ZNF570Q96NI8 536 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 INPP4AQ96PE3 977 aaPredicted RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 HAUS8Q9BT25 410 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 ESRP2Q9H6T0 727 aaKnown RBP4.84□□□□□ -1.63
UBR1-205ENST00000564540 LRRC4Q9HBW1 653 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 MAGEE1Q9HCI5 957 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 ZNF224Q9NZL3 707 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 HCN3Q9P1Z3 774 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 SIX4Q9UIU6 781 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 TINAGQ9UJW2 476 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 RCOR1Q9UKL0 485 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 FAM96BQ9Y3D0 163 aa4.84□□□□□ -1.63
UBR1-205ENST00000564540 TEX13CA0A0J9YWL9 993 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 GAGE10A6NGK3 116 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 TNPO2O14787 897 aaKnown RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 MID1O15344 667 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 PLRG1O43660 514 aaKnown RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 KRT86O43790 486 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 KRT36O76013 467 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 MT-CYBP00156 380 aaPredicted RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 CYC1P08574 325 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 G6PDP11413 515 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 CCT5P48643 541 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 TLE2Q04725 743 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 GALNT2Q10471 571 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 ZBTB17Q13105 803 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 BIRC3Q13489 604 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 KRT81Q14533 505 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 DHX8Q14562 1220 aaKnown RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 ATP13A5Q4VNC0 1218 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 PPP6R3Q5H9R7 873 aaPredicted RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 FOXRED2Q8IWF2 684 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 NAGSQ8N159 534 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 ZCCHC9Q8N567 271 aaKnown RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 SECTM1Q8WVN6 248 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 NODALQ96S42 347 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 KXD1Q9BQD3 176 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 FUZQ9BT04 418 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 GLIS2Q9BZE0 524 aaPredicted RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 BPIFA1Q9NP55 256 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 MKKSQ9NPJ1 570 aaPredicted RBP4.83□□□□□ -1.64
UBR1-205ENST00000564540 TCF7L2Q9NQB0 619 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 CNGB3Q9NQW8 809 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 SAGE1Q9NXZ1 904 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 PCDHAC2Q9Y5I4 1007 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 PSAT1Q9Y617 370 aa4.83□□□□□ -1.64
UBR1-205ENST00000564540 ATXN2Q99700 1313 aaKnown RBP4.82□□□□□ -1.64
UBR1-205ENST00000564540 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 RRN3P2A6NIE6 340 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 IGLV2-11P01706 119 aa4.82□□□□□ -1.64
UBR1-205ENST00000564540 MMP2P08253 660 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms