RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 C1orf141Q5JVX7 400 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 AKNAD1Q5T1N1 836 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 PRAMEF17Q5VTA0 474 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 FAM57BQ71RH2 274 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 SLFN11Q7Z7L1 901 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 WDR63Q8IWG1 891 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 SLC25A41Q8N5S1 370 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 DPP10Q8N608 796 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 OSR1Q8TAX0 266 aaPredicted RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 ATOH1Q92858 354 aaPredicted RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 TMEM47Q9BQJ4 181 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 TUBB6Q9BUF5 446 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 EFHD1Q9BUP0 239 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 DDX4Q9NQI0 724 aaKnown RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 PAG1Q9NWQ8 432 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 TLK1Q9UKI8 766 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 UTS2RQ9UKP6 389 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 PACSIN3Q9UKS6 424 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 MAU2Q9Y6X3 613 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 TYW5A2RUC4 315 aaKnown RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 DPPA5A6NC42 116 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 NPIPB8E9PQR5 432 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 RHODO00212 210 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 RNF8O76064 485 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 TPOP07202 933 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 MYZAPP0CAP1 466 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 IFNAR1P17181 557 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 STAT2P52630 851 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 GALCP54803 685 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 ACSM2AQ08AH3 577 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 RUNX2Q13950 521 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 SOWAHAQ2M3V2 549 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 ZSCAN23Q3MJ62 389 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 ACSM2BQ68CK6 577 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 LCTLQ6UWM7 567 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 TRILQ7L0X0 811 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 LINGO2Q7L985 606 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 GALNT13Q8IUC8 556 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 ZCCHC9Q8N567 271 aaKnown RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 GPATCH11Q8N954 259 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 FAM98AQ8NCA5 519 aaKnown RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 TRPC4APQ8TEL6 797 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 ELMOD3Q96FG2 381 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 ZNF333Q96JL9 665 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 WDR83Q9BRX9 315 aaKnown RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 KLHL4Q9C0H6 718 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 HRH4Q9H3N8 390 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 OSGEPL1Q9H4B0 414 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 PLK3Q9H4B4 646 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 DENND2DQ9H6A0 471 aaPredicted RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 MVB12BQ9H7P6 319 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 PNRC2Q9NPJ4 139 aaKnown RBP2.66□□□□□ -1.98
CHD9-209ENST00000564255 BTBD3Q9Y2F9 522 aa2.66□□□□□ -1.98
CHD9-209ENST00000564255 PI4K2BG5E9Z4 385 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 SMIM22K7EJ46 135 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 UGDHO60701 494 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 ACTN1P12814 892 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CHATP28329 748 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CIITAP33076 1130 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CAPZA2P47755 286 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CLCN5P51795 746 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 TFAP4Q01664 338 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CXCL9Q07325 125 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 TFCP2Q12800 502 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 LPIN1Q14693 890 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 ZNF628Q5EBL2 1059 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 RARS2Q5T160 578 aaKnown RBP2.65□□□□□ -1.98
CHD9-209ENST00000564255 KRT80Q6KB66 452 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CRIP3Q6Q6R5 217 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 MCEMP1Q8IX19 187 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 MMP21Q8N119 569 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 ZBTB2Q8N680 514 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 HUS1BQ8NHY5 278 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 PTPMT1Q8WUK0 201 aaPredicted RBP2.65□□□□□ -1.98
CHD9-209ENST00000564255 ZKSCAN4Q969J2 545 aaPredicted RBP2.65□□□□□ -1.98
CHD9-209ENST00000564255 IGSF8Q969P0 613 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CEP295NLQ96MC4 621 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 PAFAH2Q99487 392 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 MSTO1Q9BUK6 570 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 KIFC3Q9BVG8 833 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 ZNF341Q9BYN7 854 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 B3GNT4Q9C0J1 378 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 SIL1Q9H173 461 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 PLAGL1Q9UM63 463 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 CMAHPQ9Y471 501 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 SLC4A4Q9Y6R1 1079 aa2.65□□□□□ -1.98
CHD9-209ENST00000564255 A0A1B0GVM2 712 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 hCG_1809904A0A1W2PP81 198 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 A0A1W2PPE2 198 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 A0A1W2PR64 198 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 LRRC72A6NJI9 287 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 PRPF4O43172 522 aaKnown RBP eCLIP2.65□□□□□ -1.99
CHD9-209ENST00000564255 TBCAO75347 108 aaKnown RBP2.65□□□□□ -1.99
CHD9-209ENST00000564255 GCP02774 474 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 MMP3P08254 477 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 ETFAP13804 333 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 DCTDP32321 178 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 TNFSF8P32971 234 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 LMAN1P49257 510 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 LIG4P49917 911 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms