RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 ZNF229Q9UJW7 825 aa5.96□□□□□ -1.45
TUBGCP4-207ENST00000563963 PARP4Q9UKK3 1724 aaKnown RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 A0A0U1RQK1 487 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZNF320A2RRD8 509 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 PGRMC2O15173 223 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 GPRIN2O60269 458 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 MFAP3LO75121 409 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 NOL4O94818 638 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 RPP14O95059 124 aaKnown RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 DEXIO95424 95 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ARP10275 920 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 COX4I1P13073 169 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 MCM7P33993 719 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 GPR3P46089 330 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 NT5C2P49902 561 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 CHN2P52757 468 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 CASP6P55212 293 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 STRN3Q13033 797 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 MADCAM1Q13477 382 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 KARSQ15046 597 aaKnown RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 WDR72Q3MJ13 1102 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 RIPPLY2Q5TAB7 128 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 FAM160B1Q5W0V3 765 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 CXorf57Q6NSI4 855 aaKnown RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ATG14Q6ZNE5 492 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 FBXO11Q86XK2 927 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 C2CD5Q86YS7 1000 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 CCDC71Q8IV32 467 aaPredicted RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 BEST2Q8NFU1 509 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 KCNG4Q8TDN1 519 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ADAMTS18Q8TE60 1221 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 HTR3CQ8WXA8 447 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ELMO2Q96JJ3 720 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 DMRTA2Q96SC8 542 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 MND1Q9BWT6 205 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 OR51B6Q9H340 312 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 TRMT13Q9NUP7 481 aaKnown RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 MAT2BQ9NZL9 334 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZMYM5Q9UJ78 669 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 APPL1Q9UKG1 709 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 USP18Q9UMW8 372 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 RNF24Q9Y225 148 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 SAR1BQ9Y6B6 198 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 RFX7Q2KHR2 1363 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 BRWD3Q6RI45 1802 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 FSCN2O14926 492 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ZBTB5O15062 677 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 COX5BP10606 129 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 DSG3P32926 999 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 TRA2BP62995 288 aaKnown RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ITGADQ13349 1161 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 SPRED3Q2MJR0 410 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 C2orf76Q3KRA6 126 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 C11orf57Q6ZUT1 292 aaPredicted RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 PAGE2Q7Z2X7 111 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 LHFPL3Q86UP9 236 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 SGMS1Q86VZ5 419 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 TDRPQ86YL5 185 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 NIM1KQ8IY84 436 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 TRAM1L1Q8N609 369 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 CPNE4Q96A23 557 aaPredicted RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 ANAPC16Q96DE5 110 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 MFSD3Q96ES6 412 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 UHRF1Q96T88 793 aaPredicted RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 PDCD10Q9BUL8 212 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 HDHD2Q9H0R4 259 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 RANBP3Q9H6Z4 567 aaPredicted RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 CABP5Q9NP86 173 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 CRTAC1Q9NQ79 661 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 PLSCR4Q9NRQ2 329 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 FBXO28Q9NVF7 368 aa5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 SUCOQ9UBS9 1254 aaKnown RBP5.96□□□□□ -1.46
TUBGCP4-207ENST00000563963 DENND3A2RUS2 1198 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 NPC1O15118 1278 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 NSA2O95478 260 aaKnown RBP5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 PRAMEF12O95522 483 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 CYC1P08574 325 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 HBQ1P09105 142 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 PAEPP09466 180 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 OR4E1P0C645 316 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 MARK3P27448 753 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 RABIFP47224 123 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 RHDQ02161 417 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 EIF2S3LQ2VIR3 472 aaKnown RBP5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 IQCCQ4KMZ1 466 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 UNC5AQ6ZN44 842 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 C12orf29Q8N999 325 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 ATG16L2Q8NAA4 619 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 KCTD6Q8NC69 237 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 DAGLBQ8NCG7 672 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 OR2L5Q8NG80 312 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 TCP10LQ8TDR4 215 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 FIG4Q92562 907 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 FAM227BQ96M60 508 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 TWNKQ96RR1 684 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 KLC2Q9H0B6 622 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 IGSF9Q9P2J2 1179 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 NOCTQ9UK39 431 aaKnown RBP5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 SNX24Q9Y343 169 aa5.95□□□□□ -1.46
TUBGCP4-207ENST00000563963 TCHHQ07283 1943 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms