RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 HOXA11P31270 313 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 RECQLP46063 649 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 ZNF135P52742 658 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 FAM72AQ5TYM5 149 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 FAM72DQ6L9T8 149 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 SCIMPQ6UWF3 145 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 ZBTB49Q6ZSB9 765 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 GPR141Q7Z602 305 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 FAM72BQ86X60 149 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 SNX31Q8N9S9 440 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
RNF40-204ENST00000563683 TEKT5Q96M29 485 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 ATP13A1Q9HD20 1204 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.51□□□□□ -0.73
RNF40-204ENST00000563683 IGSF9Q9P2J2 1179 aa10.51□□□□□ -0.73
RNF40-204ENST00000563683 KANSL1LA0AUZ9 987 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 NEMP2A6NFY4 417 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 A8MX80 341 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 ADCY6O43306 1168 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 VPS26AO75436 327 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 LTA4HP09960 611 aaKnown RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 ZNF12P17014 697 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 WARSP23381 471 aaKnown RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 VARSP26640 1264 aaKnown RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 CYP2C18P33260 490 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 TUSC3Q13454 348 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 SPRYD7Q5W111 196 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 C16orf59Q7L2K0 433 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 SLC22A9Q8IVM8 553 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 PHTF2Q8N3S3 785 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 FSTL5Q8N475 847 aaPredicted RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 CARNMT1Q8N4J0 409 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 RP9Q8TA86 221 aaKnown RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 RMND5BQ96G75 393 aaPredicted RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 SEMA4BQ9NPR2 832 aaPredicted RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 PNPLA3Q9NST1 481 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 CROTQ9UKG9 612 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 ORC6Q9Y5N6 252 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 SAC3D1A6NKF1 404 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 KATNA1O75449 491 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 TRIM16O95361 564 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 GRK4P32298 578 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 ALDH3B2P48448 385 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 NAA20P61599 178 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 CDH18Q13634 790 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 TMEM198Q66K66 360 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 CLEC4FQ8N1N0 589 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 HM13Q8TCT9 377 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 BORCS5Q969J3 196 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 FTHL17Q9BXU8 183 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 ZYG11BQ9C0D3 744 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 SYTL2Q9HCH5 934 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 SCUBE2Q9NQ36 999 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 STARD7Q9NQZ5 370 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 SCN9AQ15858 1988 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 MEIS3P2A8K0S8 358 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 CNMDO75829 334 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 GUCA1CO95843 209 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 AMHP03971 560 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 FLT3LGP49771 235 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 TAS2R39P59534 338 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 NFYCQ13952 458 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 GALNT3Q14435 633 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 PIWIL4Q7Z3Z4 852 aaKnown RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 FBXO39Q8N4B4 442 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 DDHD1Q8NEL9 900 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 TMEM40Q8WWA1 233 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 ABHD8Q96I13 439 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 PHF12Q96QT6 1004 aa10.5□□□□□ -0.73
RNF40-204ENST00000563683 POLR1EQ9GZS1 481 aaKnown RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 FAM124BQ9H5Z6 455 aaPredicted RBP10.5□□□□□ -0.73
RNF40-204ENST00000563683 BOLA2-SMG1P6H3BVE0 249 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 SLC22A2O15244 555 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 CLASP2O75122 1294 aaKnown RBP10.49□□□□□ -0.73
RNF40-204ENST00000563683 GLUD2P49448 558 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 PRKAA2P54646 552 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 TRNP1Q6NT89 227 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 CYS1Q717R9 158 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 DSELQ8IZU8 1212 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 ZNF786Q8N393 782 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 PTGR2Q8N8N7 351 aaPredicted RBP10.49□□□□□ -0.73
RNF40-204ENST00000563683 FAM156AQ8NDB6 213 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 KBTBD7Q8WVZ9 684 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 MRPL57Q9BQC6 102 aaKnown RBP10.49□□□□□ -0.73
RNF40-204ENST00000563683 THUMPD3Q9BV44 507 aaKnown RBP10.49□□□□□ -0.73
RNF40-204ENST00000563683 SLC2A11Q9BYW1 496 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 CXCL16Q9H2A7 254 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 ADNPQ9H2P0 1102 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 VWA7Q9Y334 891 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 TTC24A2A3L6 582 aaPredicted RBP10.49□□□□□ -0.73
RNF40-204ENST00000563683 ZNF701M0R085 212 aaPredicted RBP10.49□□□□□ -0.73
RNF40-204ENST00000563683 BTN3A1O00481 513 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 AIF1P55008 147 aa10.49□□□□□ -0.73
RNF40-204ENST00000563683 TXNL4AP83876 142 aaKnown RBP10.49□□□□□ -0.73
RNF40-204ENST00000563683 GK3PQ14409 553 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms