RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SRSF6Q13247 344 aaKnown RBP16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 MTM1Q13496 603 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 GRM3Q14832 879 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 ERAP2Q6P179 960 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 BRAT1Q6PJG6 821 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 CCDC81Q6ZN84 652 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 ARHGAP36Q6ZRI8 547 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 APTXQ7Z2E3 356 aaKnown RBP16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 SRLQ86TD4 932 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 ARHGAP12Q8IWW6 846 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 PELI3Q8N2H9 469 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 FBXO39Q8N4B4 442 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 ARFGAP1Q8N6T3 406 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 TUBGCP5Q96RT8 1024 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 PEBP4Q96S96 227 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 LRRN3Q9H3W5 708 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 FGF22Q9HCT0 170 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 MRPL40Q9NQ50 206 aaKnown RBP16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 DGKBQ9Y6T7 804 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 ANKRD36A6QL64 1941 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 RECQL5O94762 991 aaPredicted RBP16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 TNFP01375 233 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 TPM2P07951 284 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 CSNK1DP48730 415 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 INHBCP55103 352 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 TGIF1Q15583 401 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 AFMIDQ63HM1 303 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 ACAD10Q6JQN1 1059 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 OGFOD3Q6PK18 319 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 LIPIQ6XZB0 460 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 RBM43Q6ZSC3 357 aaKnown RBP16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 RAB11FIP2Q7L804 512 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 CCNL2Q96S94 520 aaPredicted RBP16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 SYT11Q9BT88 431 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 ATXN7L1Q9ULK2 861 aaPredicted RBP16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 AP4E1Q9UPM8 1137 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 PCDHGA7Q9Y5G6 932 aa16.89■□□□□ 0.29
HDGFL3-203ENST00000563404 ANKRD62A6NC57 917 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 B8ZZF3 427 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 PYCARD-AS1I3L0S3 204 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 CCKBRP32239 447 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 HTR7P34969 479 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 KIAA1024LP59773 190 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 UBXN1Q04323 297 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 MAMLD1Q13495 774 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 CFAP58Q5T655 872 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 DCUN1D2Q6PH85 259 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 CYP4V2Q6ZWL3 525 aaPredicted RBP16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 TMPRSS9Q7Z410 1059 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 CCNJLQ8IV13 435 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 TP53INP2Q8IXH6 220 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 NPWQ8N729 165 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 Q8N9G6 341 aaPredicted RBP16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 OR56A4Q8NGH8 313 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 CCL4L1Q8NHW4 92 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 MED8Q96G25 268 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 ERGIC2Q96RQ1 377 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 KCTD15Q96SI1 283 aaPredicted RBP16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 LGR4Q9BXB1 951 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 TMEM168Q9H0V1 697 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 HSD3B7Q9H2F3 369 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 DHX35Q9H5Z1 703 aaKnown RBP16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 APPL1Q9UKG1 709 aa16.88■□□□□ 0.29
HDGFL3-203ENST00000563404 CFAP69A5D8W1 941 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 LRRC10BA6NIK2 292 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 AGRPO00253 132 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 EEF2KO00418 725 aaKnown RBP16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 TRAFD1O14545 582 aaPredicted RBP16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 ATMINO43313 823 aaPredicted RBP16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 PALMO75781 387 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 ITIH1P19827 911 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 SERPINA4P29622 427 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 TRIM23P36406 574 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 ZFP36L1Q07352 338 aaKnown RBP16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 EIF3IQ13347 325 aaKnown RBP16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 CERCAMQ5T4B2 595 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 IRF2BP2Q7Z5L9 587 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 JAMLQ86YT9 394 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 EXD3Q8N9H8 876 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 OR6C4Q8NGE1 309 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 ATL2Q8NHH9 583 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 SNRNP25Q9BV90 132 aaKnown RBP16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 TRIM7Q9C029 511 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 STRADBQ9C0K7 418 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 ATP13A3Q9H7F0 1226 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 PCSK1NQ9UHG2 260 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 ACSL6Q9UKU0 697 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 RNF215Q9Y6U7 377 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 SCN8AQ9UQD0 1980 aa16.87■□□□□ 0.29
HDGFL3-203ENST00000563404 TTC24A2A3L6 582 aaPredicted RBP16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 ARHGAP42A6NI28 874 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 A8MX80 341 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 TMX2-CTNND1H3BSU7 103 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 ELFN1P0C7U0 828 aa16.86■□□□□ 0.29
HDGFL3-203ENST00000563404 ERCC2P18074 760 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms