RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 UMODL1-AS1Q8N2C9 162 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 SERPINB11Q96P15 392 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.31
USB1-207ENST00000563149 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.31
USB1-207ENST00000563149 COQ10BQ9H8M1 238 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 ARMC1Q9NVT9 282 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 CCDC167Q9P0B6 97 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 APPL1Q9UKG1 709 aa13.15□□□□□ -0.31
USB1-207ENST00000563149 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
USB1-207ENST00000563149 KPNA6O60684 536 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 RPLP2P05387 115 aaKnown RBP13.14□□□□□ -0.31
USB1-207ENST00000563149 FGF4P08620 206 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 KCNA5P22460 613 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 CHRNA4P43681 627 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 TSPY1Q01534 308 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 MYLK3Q32MK0 819 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 HERC6Q8IVU3 1022 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 PACRGLQ8N7B6 248 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 ANKFN1Q8N957 763 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 FAM156AQ8NDB6 213 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 ZFP28Q8NHY6 868 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 LRTOMTQ8WZ04 291 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 PEX13Q92968 403 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 UROC1Q96N76 676 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 UNKQ9C0B0 810 aaKnown RBP13.14□□□□□ -0.31
USB1-207ENST00000563149 GRIP2Q9C0E4 1043 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 SENP6Q9GZR1 1112 aaPredicted RBP13.14□□□□□ -0.31
USB1-207ENST00000563149 POPDC3Q9HBV1 291 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 CYP4F12Q9HCS2 524 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 NDUFAF1Q9Y375 327 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 SQORQ9Y6N5 450 aa13.14□□□□□ -0.31
USB1-207ENST00000563149 C7orf72A4D263 438 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 PRORSD1PA6NEY8 169 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 MROH6A6NGR9 719 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 AURKAO14965 403 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 GPR182O15218 404 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 ZNF623O75123 536 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 PEX11BO96011 259 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 SLC2A3P11169 496 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 ZNF23P17027 643 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 ATXN3P54252 364 aaPredicted RBP13.13□□□□□ -0.31
USB1-207ENST00000563149 TUBA4AP68366 448 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 PURAQ00577 322 aaKnown RBP13.13□□□□□ -0.31
USB1-207ENST00000563149 MAP7D1Q3KQU3 841 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 LRRC23Q53EV4 343 aaPredicted RBP13.13□□□□□ -0.31
USB1-207ENST00000563149 ZNF789Q5FWF6 425 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 CARM1Q86X55 608 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 DHFR2Q86XF0 187 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 CASP10Q92851 521 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 SLCO4A1Q96BD0 722 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 CYP2S1Q96SQ9 504 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 TRIM15Q9C019 465 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 PCDHAC1Q9H158 963 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 TIMMDC1Q9NPL8 285 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 PNPLA3Q9NST1 481 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 NDFIP2Q9NV92 336 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 TMLHEQ9NVH6 421 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 PCDHGB4Q9UN71 923 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 PCDHGB5Q9Y5G0 923 aa13.13□□□□□ -0.31
USB1-207ENST00000563149 NYNRINQ9P2P1 1898 aaKnown RBP13.13□□□□□ -0.31
USB1-207ENST00000563149 DYTNA2CJ06 578 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 CCDC160A6NGH7 325 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 AQP12BA6NM10 295 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TNFRSF10BO14763 440 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 H6PDO95479 791 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 S1PR4O95977 384 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 BMP2P12643 396 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 ATP6V1B1P15313 513 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 RHOQP17081 205 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TYMPP19971 482 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 GPX3P22352 226 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 AFF1P51825 1210 aaKnown RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 SLC5A3P53794 718 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 BEX3Q00994 111 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 PCSK7Q16549 785 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 UNC50Q53HI1 259 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 MARC1Q5VT66 337 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 RAB44Q7Z6P3 723 aaPredicted RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 ISCA2Q86U28 154 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 AQP12AQ8IXF9 295 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TEX26Q8N6G2 289 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TSPAN14Q8NG11 270 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 OR2T34Q8NGX1 318 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 OR2T3Q8NH03 318 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 SCAMP5Q8TAC9 235 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 HM13Q8TCT9 377 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 LPPQ93052 612 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.12□□□□□ -0.31
USB1-207ENST00000563149 TADA1Q96BN2 335 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 LENG1Q96BZ8 264 aaPredicted RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 PHF21BQ96EK2 531 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms