RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 ZBED6P86452 979 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 FANCCQ00597 558 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 SLC10A7Q0GE19 358 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 RALGDSQ12967 914 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 ALG11Q2TAA5 492 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 TMCO3Q6UWJ1 677 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 ENPP7Q6UWV6 458 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 LIPIQ6XZB0 460 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 RBM44Q6ZP01 1051 aaKnown RBP13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 ARHGAP36Q6ZRI8 547 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 DPPA4Q7L190 304 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 GKN2Q86XP6 184 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 HID1Q8IV36 788 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 SLC35F3Q8IY50 421 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 BBS5Q8N3I7 341 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 ARL10Q8N8L6 244 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 ZNF248Q8NDW4 579 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 OR6C4Q8NGE1 309 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 RCOR3Q9P2K3 495 aaPredicted RBP13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 PADI4Q9UM07 663 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 DGKBQ9Y6T7 804 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 LRP4O75096 1905 aa13.17□□□□□ -0.3
AC009055.1-201ENST00000562656 RP1P56715 2156 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 CACNB4O00305 520 aaPredicted RBP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 TNFRSF10CO14798 259 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 MUSKO15146 869 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 HTRA2O43464 458 aaPredicted RBP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 RECQL5O94762 991 aaPredicted RBP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 PEX11BO96011 259 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 TNFP01375 233 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 MPOP05164 745 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 ELFN1P0C7U0 828 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 RARAP10276 462 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 CR2P20023 1033 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 AMPD1P23109 780 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 KELP23276 732 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 ITPKBP27987 946 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 TRIM23P36406 574 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 UBASH3AP57075 661 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 PCBP4P57723 403 aaKnown RBP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 GABREP78334 506 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 ZNF235Q14590 738 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 PERM1Q5SV97 790 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 PAF1Q8N7H5 531 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 NSMCE1Q8WV22 266 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 TSACCQ96A04 125 aaPredicted RBP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 NUDCD1Q96RS6 583 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 UBL7Q96S82 380 aaPredicted RBP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 RBM15Q96T37 977 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 THAP2Q9H0W7 228 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 PRORYQ9H606 182 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 OR1A2Q9Y585 309 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 PCDHGA8Q9Y5G5 932 aa13.16□□□□□ -0.3
AC009055.1-201ENST00000562656 ATRXP46100 2492 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 PDE2AO00408 941 aaPredicted RBP13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 MAFKO60675 156 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 PRKCGP05129 697 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 PCCBP05166 539 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 CYP1A2P05177 515 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 CDH6P55285 790 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 SLC25A11Q02978 314 aaKnown RBP13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 LUZP1Q86V48 1076 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 TP53INP2Q8IXH6 220 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 OR56A4Q8NGH8 313 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 PCDH19Q8TAB3 1148 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 FAM71BQ8TC56 605 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 HSPH1Q92598 858 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 CCDC3Q9BQI4 270 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 MGME1Q9BQP7 344 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 PCDH18Q9HCL0 1135 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 ASCL3Q9NQ33 180 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 THSD1Q9NS62 852 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 ANAPC7Q9UJX3 599 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 PHTF1Q9UMS5 762 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 ENTPD2Q9Y5L3 495 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 NBEAQ8NFP9 2946 aa13.15□□□□□ -0.3
AC009055.1-201ENST00000562656 A0A087X0T9 212 aa13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 SYCE3A1L190 88 aa13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 GOLGA6L19H0YKK7 550 aa13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 TMX2-CTNND1H3BSU7 103 aa13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 TK2O00142 265 aa13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 MYO1FO00160 1098 aa13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 NTN3O00634 580 aaPredicted RBP13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 FAM228BP0C875 321 aa13.14□□□□□ -0.31
AC009055.1-201ENST00000562656 CYP2A6P11509 494 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms