RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PCDH9Q9HC56 1237 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 TM9SF3Q9HD45 589 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 SEMA4GQ9NTN9 838 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 SEPT10Q9P0V9 454 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 KLHL8Q9P2G9 620 aaPredicted RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 B4GALT6Q9UBX8 382 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 FAM153AQ9UHL3 310 aa13.49□□□□□ -0.25
CDH1-204ENST00000562118 EIF2B4Q9UI10 523 aaKnown RBP13.49□□□□□ -0.25
CDH1-204ENST00000562118 ATXN2Q99700 1313 aaKnown RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 NPIPB15A6NHN6 443 aaPredicted RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 ANKRD66B4E2M5 251 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 PRAMEF26H0Y7S4 382 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 WNT9AO14904 365 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 BCAT2O15382 392 aaPredicted RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 CEP104O60308 925 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 HEXIM1O94992 359 aaKnown RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 FSBPO95073 299 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 MT-CYBP00156 380 aaPredicted RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 C6P13671 934 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 MAOBP27338 520 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 VIPR1P32241 457 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 GNG11P61952 73 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 ITKQ08881 620 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 OVGP1Q12889 678 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 MPP3Q13368 585 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 QPCTQ16769 361 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 LRRC73Q5JTD7 316 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 FAM182AQ5T1J6 154 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 ITPRIPL1Q6GPH6 555 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 GCNT7Q6ZNI0 430 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 TP53I13Q8NBR0 393 aaPredicted RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 FAM174AQ8TBP5 190 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 PIGKQ92643 395 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 COQ10AQ96MF6 247 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 PPP1R2P1Q96PQ5 205 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 NAPGQ99747 312 aaPredicted RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 TMEM121Q9BTD3 319 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 MLPHQ9BV36 600 aaPredicted RBP13.48□□□□□ -0.25
CDH1-204ENST00000562118 SLC17A9Q9BYT1 436 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 HOMER3Q9NSC5 361 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 NCDNQ9UBB6 729 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 CHKBQ9Y259 395 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 HS3ST3A1Q9Y663 406 aa13.48□□□□□ -0.25
CDH1-204ENST00000562118 CEP250Q9BV73 2442 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 LNP1A1A4G5 178 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 IGLON5A6NGN9 336 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 FAM47DPA6NHR8 397 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 VILLO15195 856 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 RAD51BO15315 384 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 NEBLO76041 1014 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 WNT1P04628 370 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 GNSP15586 552 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 ZNF30P17039 623 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 HNRNPA2B1P22626 353 aaKnown RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 LIG3P49916 1009 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 WNT3AP56704 352 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 ETF1P62495 437 aaKnown RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 CDK18Q07002 472 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 SPEM2Q0P670 501 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 MSLNQ13421 630 aaPredicted RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 CNGA3Q16281 694 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 CFAP58Q5T655 872 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 KYAT3Q6YP21 454 aaKnown RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 PRR23CQ6ZRP0 262 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 USP45Q70EL2 814 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 PID1Q7Z2X4 250 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 CREG2Q8IUH2 290 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 C17orf53Q8N3J3 647 aaPredicted RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 ZCCHC9Q8N567 271 aaKnown RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 DCLK2Q8N568 766 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 FAM71DQ8N9W8 422 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 MFSD2AQ8NA29 543 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 CCDC110Q8TBZ0 833 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 C1orf54Q8WWF1 131 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 SLC6A18Q96N87 628 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 NAP1L3Q99457 506 aaPredicted RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 ARNT2Q9HBZ2 717 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 NFKBIL1Q9UBC1 381 aaPredicted RBP13.47□□□□□ -0.25
CDH1-204ENST00000562118 RSPH14Q9UHP6 348 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 NEU2Q9Y3R4 380 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 TTLL3Q9Y4R7 772 aa13.47□□□□□ -0.25
CDH1-204ENST00000562118 PATE3B3GLJ2 98 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 TOR1BO14657 336 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 ANXA9O76027 345 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 TM7SF2O76062 418 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 STK10O94804 968 aaKnown RBP13.46□□□□□ -0.25
CDH1-204ENST00000562118 PCDH8O95206 1070 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 METTL18O95568 372 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 NDST3O95803 873 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 PRKCGP05129 697 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.25
CDH1-204ENST00000562118 NFKBIAP25963 317 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 PSMB4P28070 264 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 TEAD1P28347 426 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms