RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MROH8Q9H579 483 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 CCM2LQ9NUG4 571 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 A0A0J9YYE9 177 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 CLIC3O95833 236 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 FASP25445 335 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 PSMA4P25789 261 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 SLC5A3P53794 718 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 PCSK7Q16549 785 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 KIAA0319Q5VV43 1072 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 RETREG3Q86VR2 466 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 SLC22A9Q8IVM8 553 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 FUNDC1Q8IVP5 155 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 EXT2Q93063 718 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 ALG9Q9H6U8 611 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 CXorf21Q9HAI6 301 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 SPON1Q9HCB6 807 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 CNGB3Q9NQW8 809 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 FAIMQ9NVQ4 179 aa14.03□□□□□ -0.16
VPS9D1-202ENST00000561976 C9JVG2 144 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 NME4O00746 187 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 UBFD1O14562 309 aaKnown RBP14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 MYF6P23409 242 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 VPS26BQ4G0F5 336 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 GPR107Q5VW38 600 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 LARP4Q71RC2 724 aaKnown RBP eCLIP14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 PACRGLQ8N7B6 248 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 MFSD2AQ8NA29 543 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 GIPC3Q8TF64 312 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 C19orf60Q96EN9 201 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 TSGA13Q96PP4 275 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 CAMKK2Q96RR4 588 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 SMOQ99835 787 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 PAIP1Q9H074 479 aaKnown RBP14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 HIPK3Q9H422 1215 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 ENTPD7Q9NQZ7 604 aa14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 PTBP2Q9UKA9 531 aaKnown RBP14.02□□□□□ -0.16
VPS9D1-202ENST00000561976 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 ANGPT2O15123 496 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 ATP6V1G1O75348 118 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 CCNCP24863 283 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 ACADVLP49748 655 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 CTBSQ01459 385 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 CAPRIN1Q14444 709 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 INTS11Q5TA45 600 aaKnown RBP14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 KIAA0930Q6ICG6 404 aaPredicted RBP14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 C8orf82Q6P1X6 216 aaPredicted RBP14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 DCLRE1AQ6PJP8 1040 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 LIMS2Q7Z4I7 341 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 LRRC43Q8N309 656 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 DPF3Q92784 378 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 ZUFSPQ96AP4 578 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 C3orf30Q96M34 536 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 C9orf16Q9BUW7 83 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 GSTO2Q9H4Y5 243 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 CRTAC1Q9NQ79 661 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 UTRNP46939 3433 aa14.02□□□□□ -0.17
VPS9D1-202ENST00000561976 TMX2-CTNND1H3BSU7 103 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 CLOCKO15516 846 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 CACNG3O60359 315 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 GPR32O75388 356 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ALDOCP09972 364 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 IGFBP6P24592 240 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 HMOX2P30519 316 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 CXCR3P49682 368 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ZNF135P52742 658 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 CDH13P55290 713 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 NOMO2Q5JPE7 1267 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 FAM35AQ86V20 835 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 EPHX4Q8IUS5 362 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 LZTR1Q8N653 840 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 PTCD2Q8WV60 388 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ANKRD49Q8WVL7 239 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 PGAP3Q96FM1 320 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 TSPAN17Q96FV3 270 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ZNF419Q96HQ0 510 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 TREX1Q9NSU2 369 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 TBC1D23Q9NUY8 699 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 RBM22Q9NW64 420 aaKnown RBP eCLIP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 GPRC5DQ9NZD1 345 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 CACNG4Q9UBN1 327 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 GIMAP2Q9UG22 337 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 OAZ3Q9UMX2 235 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 TIMM13Q9Y5L4 95 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 SBF1O95248 1867 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 RALGAPA2Q2PPJ7 1873 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 AQP12BA6NM10 295 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 DLGAP1O14490 977 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ATE1O95260 518 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 TFPTP0C1Z6 253 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 DARSP14868 501 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 IMPDH1P20839 514 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 GPX3P22352 226 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 NAA20P61599 178 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ACAP2Q15057 778 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ANKDD1AQ495B1 522 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 ELMSAN1Q6PJG2 1045 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 Q6ZNX1 250 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 AQP12AQ8IXF9 295 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 CPNE9Q8IYJ1 553 aa14.01□□□□□ -0.17
VPS9D1-202ENST00000561976 OFCC1Q8IZS5 231 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms