RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 KPNB1Q14974 876 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 CYTH1Q15438 398 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 ACCSLQ4AC99 568 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 FSCBQ5H9T9 825 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 METTL21CQ5VZV1 264 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 CXorf57Q6NSI4 855 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 KLC3Q6P597 504 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 HERC6Q8IVU3 1022 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 OR13C4Q8NGS5 318 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 SGF29Q96ES7 293 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 UBXN10Q96LJ8 280 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 NSMCE3Q96MG7 304 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 RC3H2Q9HBD1 1191 aaKnown RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 SCUBE2Q9NQ36 999 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 TCF7L2Q9NQB0 619 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 MAN1C1Q9NR34 630 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 VTI1BQ9UEU0 232 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 ZDHHC2Q9UIJ5 367 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 STOML2Q9UJZ1 356 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
SMG1-205ENST00000561947 KIAA1671Q9BY89 1806 aa9.85□□□□□ -0.83
SMG1-205ENST00000561947 MEI4A8MW99 385 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 E9PBE3 544 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SLCO1B7G3V0H7 640 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 GRID2O43424 1007 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 KLHL41O60662 606 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 TM7SF2O76062 418 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SNUPNO95149 360 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 RBP1P09455 135 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 PIRTP0C851 137 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 TPBGLP0DKB5 382 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 MBL2P11226 248 aaPredicted RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 LAG3P18627 525 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 TFEBP19484 476 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 OGNP20774 298 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 PRDX6P30041 224 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CPOXP36551 454 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SLC26A3P40879 764 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SCNN1BP51168 640 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 COPAP53621 1224 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CDKN2DP55273 166 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 NSUN2Q08J23 767 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMG1-205ENST00000561947 RNF219Q5W0B1 726 aaPredicted RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 MRNIPQ6NTE8 343 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 FAM117BQ6P1L5 589 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 C16orf59Q7L2K0 433 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 PIWIL4Q7Z3Z4 852 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 TMCO2Q7Z6W1 182 aaPredicted RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 DNAJB7Q7Z6W7 309 aaPredicted RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 RNF135Q8IUD6 432 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 POU5F2Q8N7G0 328 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CCNYL1Q8N7R7 359 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CCDC126Q96EE4 140 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 EXOC2Q96KP1 924 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 OR52B2Q96RD2 323 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 POMKQ9H5K3 350 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 DCLRE1BQ9H816 532 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CATSPERZQ9NTU4 200 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 TMEM39AQ9NV64 488 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 NCKIPSDQ9NZQ3 722 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ATP11BQ9Y2G3 1177 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 C15orf41Q9Y2V0 281 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 SPO11Q9Y5K1 396 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ABHD14A-ACY1A0A1B0GW23 586 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CBX4O00257 560 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CRTAMO95727 393 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 LATS1O95835 1130 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 HOXB8P17481 243 aaPredicted RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 CES1P23141 567 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ELF1P32519 619 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ZNF140P52738 457 aaPredicted RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 DEFB103AP81534 67 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 NAA25Q14CX7 972 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ACAP2Q15057 778 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 KHDC1Q4VXA5 237 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 ACSBG2Q5FVE4 666 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 TRIM67Q6ZTA4 783 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 TMEM150AQ86TG1 271 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 DDX53Q86TM3 631 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 SPNS2Q8IVW8 549 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SCUBE1Q8IWY4 988 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 TCEAL8Q8IYN2 117 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 PHTF2Q8N3S3 785 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 OR4L1Q8NH43 312 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ANKRD49Q8WVL7 239 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 WDR60Q8WVS4 1066 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CMTM5Q96DZ9 223 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 ZFRQ96KR1 1074 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 TDRD1Q9BXT4 1180 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 CRISPLD2Q9H0B8 497 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 MUC3BQ9H195 1237 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SMPD4Q9NXE4 827 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SPG21Q9NZD8 308 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 CRYL1Q9Y2S2 319 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 INSL5Q9Y5Q6 135 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.84□□□□□ -0.83
SMG1-205ENST00000561947 GBF1Q92538 1859 aa9.84□□□□□ -0.83
SMG1-205ENST00000561947 NEMP2A6NFY4 417 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms