RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CCDC162PA2VCL2 907 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 C2orf81A6NN90 581 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 AURKAO14965 403 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 HTRA2O43464 458 aaPredicted RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 SOCS5O75159 536 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 SNNO75324 88 aaPredicted RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 GLP2RO95838 553 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 APOA4P06727 396 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 TROVE2P10155 538 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNX1-211ENST00000560829 SRCP12931 536 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 ALDH3A1P30838 453 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 IRF9Q00978 393 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 OCRLQ01968 901 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 BST1Q10588 318 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 DMC1Q14565 340 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 CHI3L2Q15782 390 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 FUT11Q495W5 492 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 LACTB2Q53H82 288 aaPredicted RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 FASTKD1Q53R41 847 aaKnown RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 ZNF789Q5FWF6 425 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 MRNIPQ6NTE8 343 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 CNSTQ6PJW8 725 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 TRPM8Q7Z2W7 1104 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 RBM23Q86U06 439 aaKnown RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 SLC41A1Q8IVJ1 513 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNX1-211ENST00000560829 OR6Y1Q8NGX8 325 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 OR4L1Q8NH43 312 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
SNX1-211ENST00000560829 OMDQ99983 421 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 C19orf43Q9BQ61 176 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 BBS2Q9BXC9 721 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 SLC2A11Q9BYW1 496 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 KDM4CQ9H3R0 1056 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 TLE6Q9H808 572 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 ZNF358Q9NW07 568 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 ACOT9Q9Y305 439 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
SNX1-211ENST00000560829 A0A087X1B8 175 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 H7C0S8 307 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 CCL22O00626 93 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 SLC9A3R1O14745 358 aaPredicted RBP12.94□□□□□ -0.34
SNX1-211ENST00000560829 CD3EAPO15446 510 aaKnown RBP12.94□□□□□ -0.34
SNX1-211ENST00000560829 PGLSO95336 258 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 IGSF6O95976 241 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 HOXB8P17481 243 aaPredicted RBP12.94□□□□□ -0.34
SNX1-211ENST00000560829 LPOP22079 712 aaPredicted RBP12.94□□□□□ -0.34
SNX1-211ENST00000560829 TAS2R39P59534 338 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 TMPRSS15P98073 1019 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 PTPRCAPQ14761 206 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 TYSND1Q2T9J0 566 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 ARMC12Q5T9G4 340 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 CES4AQ5XG92 561 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
SNX1-211ENST00000560829 CCDC121Q6ZUS5 278 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 RAPH1Q70E73 1250 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 CCDC91Q7Z6B0 441 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 CEP97Q8IW35 865 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 TTC30BQ8N4P2 665 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 CELF5Q8N6W0 485 aaKnown RBP12.94□□□□□ -0.34
SNX1-211ENST00000560829 OR2AP1Q8NGE2 309 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 RDH11Q8TC12 318 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 C10orf82Q8WW14 230 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 PIH1D2Q8WWB5 315 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 MYO19Q96H55 970 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 ELMO2Q96JJ3 720 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 PBX4Q9BYU1 374 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 TM6SF2Q9BZW4 377 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 LINC00597Q9H2U6 94 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 NMRAL1Q9HBL8 299 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 MAGEE1Q9HCI5 957 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 MID2Q9UJV3 735 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 RRP15Q9Y3B9 282 aaKnown RBP12.94□□□□□ -0.34
SNX1-211ENST00000560829 USH1CQ9Y6N9 552 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 MYLKQ15746 1914 aa12.94□□□□□ -0.34
SNX1-211ENST00000560829 OR51F1A6NGY5 319 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 NEDD8-MDP1E9PL57 170 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 PHGDHO43175 533 aaKnown RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 BUD23O43709 281 aaKnown RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 FGF3P11487 239 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 PABPC1P11940 636 aaKnown RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 TYRP14679 529 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 CPA3P15088 417 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 SLC8A1P32418 973 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 GMPRP36959 345 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 PBX2P40425 430 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 SULT2A1Q06520 285 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 BCL2L1Q07817 233 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 SF3A3Q12874 501 aaKnown RBP eCLIP12.93□□□□□ -0.345e-6■■■■■ 39.5
SNX1-211ENST00000560829 DGKKQ5KSL6 1271 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 LY6G5CQ5SRR4 150 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 AFTPHQ6ULP2 937 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 CENPLQ8N0S6 344 aaPredicted RBP12.93□□□□□ -0.34
SNX1-211ENST00000560829 TMEM151AQ8N4L1 468 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
SNX1-211ENST00000560829 GPATCH11Q8N954 259 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms