RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 LMX1AQ8TE12 382 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 UBE2Q2Q8WVN8 375 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CTNNBL1Q8WYA6 563 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 VOPP1Q96AW1 172 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CENPTQ96BT3 561 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 HIC2Q96JB3 615 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 NCAPGQ9BPX3 1015 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 BOCQ9BWV1 1114 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 CPEB1Q9BZB8 566 aaKnown RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 SLC13A1Q9BZW2 595 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 THSD1Q9NS62 852 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
SMAD3-214ENST00000560402 TRIM10Q9UDY6 481 aa13.71□□□□□ -0.21
SMAD3-214ENST00000560402 GCN1Q92616 2671 aaKnown RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 TSPAN11A1L157 253 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 LMO7DNF2Z398 122 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 GJB6O95452 261 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 TUBBP07437 444 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 XPAP23025 273 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 MLLT3P42568 568 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 SERINC3Q13530 473 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 ISXQ2M1V0 245 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 DEFB133Q30KQ1 61 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 GUSBP11Q6P575 273 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 RBM44Q6ZP01 1051 aaKnown RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 EFL1Q7Z2Z2 1120 aaKnown RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 TTC7BQ86TV6 843 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 DNAAF5Q86Y56 855 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 UMODL1-AS1Q8N2C9 162 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 SDR16C5Q8N3Y7 309 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 FSTL5Q8N475 847 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 TP53I13Q8NBR0 393 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 HMCESQ96FZ2 354 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 MCEEQ96PE7 176 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 AGPAT1Q99943 283 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 CNPY3Q9BT09 278 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 LRRC61Q9BV99 259 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 NOL6Q9H6R4 1146 aaKnown RBP13.7□□□□□ -0.22
SMAD3-214ENST00000560402 KLF15Q9UIH9 416 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 FZD10Q9ULW2 581 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 HYOU1Q9Y4L1 999 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 RP1P56715 2156 aa13.7□□□□□ -0.22
SMAD3-214ENST00000560402 A0A0U1RQJ8 604 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 TCRBV5S1A1TA0A578 114 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 RCCD1A6NED2 376 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 TMEM110-MUSTN1A8MSY1 372 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 RASA4BC9J798 803 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 RASA4O43374 803 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 MPOP05164 745 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 ANXA6P08133 673 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 TMEM253P0C7T8 217 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
SMAD3-214ENST00000560402 PEX5P50542 639 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 TMPRSS3P57727 454 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 C19orf57Q0VDD7 668 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 CDKN3Q16667 212 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 TMEM52BQ4KMG9 183 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 TPRG1LQ5T0D9 272 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 ESRP1Q6NXG1 681 aaKnown RBP13.69□□□□□ -0.22
SMAD3-214ENST00000560402 SCYL2Q6P3W7 929 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 RBFAQ8N0V3 343 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 ATL2Q8NHH9 583 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 KCNE4Q8WWG9 221 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 ASCL3Q9NQ33 180 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 LHX3Q9UBR4 397 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 RNF14Q9UBS8 474 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 UBA2Q9UBT2 640 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-214ENST00000560402 PCDHGA8Q9Y5G5 932 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 KALRNO60229 2985 aa13.69□□□□□ -0.22
SMAD3-214ENST00000560402 CPED1A4D0V7 1026 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 CREB3O43889 395 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 MMP20O60882 483 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 ALPIP09923 528 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 TGM2P21980 687 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 PAFAH1B1P43034 410 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 NDST2P52849 883 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 TPI1P60174 286 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 PPARDQ03181 441 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 AGERQ15109 404 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 IRF4Q15306 451 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 ELOCQ15369 112 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 PRRT3Q5FWE3 981 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 PPP1R15BQ5SWA1 713 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 TEX35Q5T0J7 233 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 CFAP58Q5T655 872 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 ERAP2Q6P179 960 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 DCUN1D2Q6PH85 259 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 BRAT1Q6PJG6 821 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 LEKR1Q6ZMV7 388 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 RHOT2Q8IXI1 618 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 SLC35F3Q8IY50 421 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 PYROXD2Q8N2H3 581 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 CCDC97Q96F63 343 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-214ENST00000560402 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
SMAD3-214ENST00000560402 ZNF641Q96N77 438 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms