RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 OCIAD1Q9NX40 245 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 SLC39A1Q9NY26 324 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 STAP1Q9ULZ2 295 aa12.89□□□□□ -0.35
RABGGTA-213ENST00000560127 CELSR1Q9NYQ6 3014 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 ZFHX3Q15911 3703 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 LOC101059948A0A1B0GTJ6 334 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 INSIG1O15503 277 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 THRAP10827 490 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 GNLYP22749 145 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 ETFBP38117 255 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 KIAA1024LP59773 190 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 TRA2AQ13595 282 aaKnown RBP eCLIP12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 SLC25A52Q3SY17 297 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 ANKS6Q68DC2 871 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 AGBL5Q8NDL9 886 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 CCDC112Q8NEF3 446 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 HMCESQ96FZ2 354 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 GDAP1L1Q96MZ0 367 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 ASPSCR1Q9BZE9 553 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 TTYH3Q9C0H2 523 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 PCDH12Q9NPG4 1184 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 SPATS2LQ9NUQ6 558 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 MFHAS1Q9Y4C4 1052 aa12.88□□□□□ -0.35
RABGGTA-213ENST00000560127 RHPN2P1A8MT19 583 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 B4E171 279 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TNFRSF10CO14798 259 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TMCC1O94876 653 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 FGF1P05230 155 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 MPSTP25325 297 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 CSF2RBP32927 897 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 CSTF2P33240 577 aaKnown RBP eCLIP12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 USP8P40818 1118 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TSPAN7P41732 249 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 LIG3P49916 1009 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 SUOXP51687 545 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 RAD51Q06609 339 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 DCAF12Q5T6F0 453 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 NKAIN2Q5VXU1 208 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TRNP1Q6NT89 227 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 ENOSF1Q7L5Y1 443 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TIPARPQ7Z3E1 657 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 NLRP14Q86W24 1093 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TRIM59Q8IWR1 403 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 NLGN4XQ8N0W4 816 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 BMPERQ8N8U9 685 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TEX19Q8NA77 164 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 NLGN4YQ8NFZ3 816 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 OR4D9Q8NGE8 314 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 KIAA1143Q96AT1 154 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 GSDMAQ96QA5 445 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TMEM9Q9P0T7 183 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 DNAI1Q9UI46 699 aa12.87□□□□□ -0.35
RABGGTA-213ENST00000560127 TSPAN11A1L157 253 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 A1L4Q6 167 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 EFCAB7A8K855 629 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 CACNB4O00305 520 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 SEMA7AO75326 666 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 VPS4BO75351 444 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 PIGNO95427 931 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 IGSF6O95976 241 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 PRKCGP05129 697 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 BMP6P22004 513 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 XPAP23025 273 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 MAP4P27816 1152 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 FLT3P36888 993 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 MAPKAPK2P49137 400 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 SNX16P57768 344 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 SEPT6Q14141 434 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 UGP2Q16851 508 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 MANEALQ5VSG8 457 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 ZNF787Q6DD87 383 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 CLEC17AQ6ZS10 378 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 FAM131BQ86XD5 332 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 NRROSQ86YC3 692 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 ZDHHC17Q8IUH5 632 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 GALNT11Q8NCW6 608 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 ZDHHC1Q8WTX9 485 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 STARD8Q92502 1023 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 RTP4Q96DX8 246 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 EFHD1Q9BUP0 239 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 LGR4Q9BXB1 951 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 MAGEH1Q9H213 219 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 CYP4F12Q9HCS2 524 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 PLCB1Q9NQ66 1216 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 PRDM8Q9NQV8 689 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 TMEM51Q9NW97 253 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 HPCAL4Q9UM19 191 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 VPS4AQ9UN37 437 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 NEU3Q9UQ49 428 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 ADGRG4Q8IZF6 3080 aa12.86□□□□□ -0.35
RABGGTA-213ENST00000560127 IGHV1OR21-1A0A087WYE8 117 aa12.85□□□□□ -0.35
RABGGTA-213ENST00000560127 PSMA7O14818 248 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms