RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ARCQ7LC44 396 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 DNPEPQ9ULA0 475 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 FKBP7Q9Y680 259 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 A0A075B6Q4 140 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 HGFP14210 728 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 CEP76Q8TAP6 659 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 PDLIM2Q96JY6 352 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 TMEM68Q96MH6 324 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 PRDM16Q9HAZ2 1276 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZSCAN5CA6NGD5 496 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 H3BNX3 289 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 CSF1RP07333 972 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ELK3P41970 407 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF227Q86WZ6 799 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 CHERPQ8IWX8 916 aaKnown RBP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 HTR3CQ8WXA8 447 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 THRSPQ92748 146 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 MARK4Q96L34 752 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZSCAN5AQ9BUG6 496 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 SQORQ9Y6N5 450 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 CTSKP43235 329 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 NAMPTP43490 491 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 POF1BQ8WVV4 589 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ANXA2P2A6NMY6 339 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 RFXANKO14593 260 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 CBX6O95503 412 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ANXA2P07355 339 aaKnown RBP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 IDO1P14902 403 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 MTHFRP42898 656 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 GALK1P51570 392 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 MLLT6P55198 1093 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC41A1Q8IVJ1 513 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 UBR7Q8N806 425 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 LGR4Q9BXB1 951 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 CNTNAP2Q9UHC6 1331 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 IFNA2P01563 188 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 IFNA21P01568 189 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 GZMAP12544 262 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 LHCGRP22888 699 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 GNASQ5JWF2 1037 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF720Q7Z2F6 126 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 TBC1D21Q8IYX1 336 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ATP10AO60312 1499 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 CLPXO76031 633 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 PIGNO95427 931 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 BAATQ14032 418 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 RXFP2Q8WXD0 754 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 GIN1Q9NXP7 522 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ABCC10Q5T3U5 1492 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 POLR1AO95602 1720 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SAGP10523 405 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 MAGEA6P43360 314 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 IRF8Q02556 426 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 PROSER3Q2NL68 480 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 CXorf40BQ96DE9 158 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SMARCD1Q96GM5 515 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 FUT8Q9BYC5 575 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 CDH19Q9H159 772 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 GRIN2AQ12879 1464 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SEPHS1P49903 392 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 HMGCS2P54868 508 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 RIPPLY1Q0D2K3 151 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 TTMPQ5BVD1 217 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 XKR6Q5GH73 641 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 STXBP5Q5T5C0 1151 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 FBXL19Q6PCT2 694 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 MPZL3Q6UWV2 235 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 DET1Q7L5Y6 550 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 PANX1Q96RD7 426 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 QTRT2Q9H974 415 aaKnown RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 AGPAT3Q9NRZ7 376 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 PRPF19Q9UMS4 504 aaKnown RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ACTL7BQ9Y614 415 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 TRMUO75648 421 aaKnown RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 OR3A3P47888 321 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 OR3A2P47893 321 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SREBF2Q12772 1141 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 AP5B1Q2VPB7 878 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SYNPOQ8N3V7 929 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 PCDH18Q9HCL0 1135 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ITGA11Q9UKX5 1188 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ASTN2O75129 1339 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 RGS6P49758 472 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 TUBP50607 506 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 TMBIM6P55061 237 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 PAN2Q504Q3 1202 aaKnown RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 RFTN2Q52LD8 501 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 HDAC7Q8WUI4 952 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 NEDD4LQ96PU5 975 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ADAM28Q9UKQ2 775 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 PSKH1P11801 424 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 MANFP55145 182 aaKnown RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 TXNL4AP83876 142 aaKnown RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 CRELD2Q6UXH1 353 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms