RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 MFSD6LQ8IWD5 586 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP3-213ENST00000559711 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 GDPD5Q8WTR4 605 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 PIH1D2Q8WWB5 315 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 SCG3Q8WXD2 468 aaKnown RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 CDKN2AIPNLQ96HQ2 116 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 TM6SF2Q9BZW4 377 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 DZANK1Q9NVP4 752 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 HACD3Q9P035 362 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 TMEM216Q9P0N5 145 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 FBXO10Q9UK96 956 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 ANKRD6Q9Y2G4 727 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 WNT6Q9Y6F9 365 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 TRANK1O15050 2925 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 DOCK6Q96HP0 2047 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 FAM95CA0A1B0GW59 222 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 CCDC162PA2VCL2 907 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 EPOPA6NHQ4 379 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 CCL22O00626 93 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 BUD23O43709 281 aaKnown RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 SOCS5O75159 536 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 GLP2RO95838 553 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 IGSF6O95976 241 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 GOT2P00505 430 aaKnown RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 COL6A2P12110 1019 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 BGNP21810 368 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 LPOP22079 712 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 CRABP2P29373 138 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 SLC8A1P32418 973 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 CTSOP43234 321 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 CLCN5P51795 746 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 RAB10P61026 200 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 POU4F1Q01851 419 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 PTPRCAPQ14761 206 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 ZNF789Q5FWF6 425 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 ARMC12Q5T9G4 340 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 MRNIPQ6NTE8 343 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 CNSTQ6PJW8 725 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 OTOAQ7RTW8 1153 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 NUDCD3Q8IVD9 361 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 PLD6Q8N2A8 252 aaKnown RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 TTC30BQ8N4P2 665 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 ANKS4BQ8N8V4 417 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 OR2AP1Q8NGE2 309 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 OR4L1Q8NH43 312 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 VOPP1Q96AW1 172 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 C1QTNF1Q9BXJ1 281 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 CEP44Q9C0F1 390 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 SLC28A3Q9HAS3 691 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 MAGEE1Q9HCI5 957 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 FBXO6Q9NRD1 293 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 MARCH4Q9P2E8 410 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 EVLQ9UI08 416 aaPredicted RBP12.73□□□□□ -0.37
USP3-213ENST00000559711 TLK1Q9UKI8 766 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 PCDHB9Q9Y5E1 797 aa12.73□□□□□ -0.37
USP3-213ENST00000559711 OR51F1A6NGY5 319 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 SLC35E2BP0CK96 405 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 OGNP20774 298 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 ABL2P42684 1182 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 GRIA4P48058 902 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 SNRPD1P62314 119 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 TMPRSS15P98073 1019 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 ECT2LQ008S8 904 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 YTHDF3Q7Z739 585 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 ADIPOR2Q86V24 386 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 CAMK1DQ8IU85 385 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 SLC41A1Q8IVJ1 513 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 OR4K2Q8NGD2 314 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 PDCD6IPQ8WUM4 868 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 OSCP1Q8WVF1 389 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 E2F7Q96AV8 911 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 MRPL38Q96DV4 380 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 RSPRY1Q96DX4 576 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 MYO19Q96H55 970 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 RPL10LQ96L21 214 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 SMIM14Q96QK8 99 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 OMDQ99983 421 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 C19orf43Q9BQ61 176 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 MECRQ9BV79 373 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 ATP13A3Q9H7F0 1226 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 ZNF358Q9NW07 568 aa12.72□□□□□ -0.37
USP3-213ENST00000559711 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
USP3-213ENST00000559711 NEFHP12036 1026 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 STMN1P16949 149 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 FSHRP23945 695 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 GMPRP36959 345 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.37
USP3-213ENST00000559711 TAS2R39P59534 338 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 IRF9Q00978 393 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 IFT88Q13099 833 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 DHCR24Q15392 516 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 TYSND1Q2T9J0 566 aa12.71□□□□□ -0.37
USP3-213ENST00000559711 MYLK3Q32MK0 819 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms