RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MAGEA10P43363 369 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 PSMD8P48556 350 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 INSCQ1MX18 579 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 ATXN7L2Q5T6C5 722 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 DET1Q7L5Y6 550 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 OR14C36Q8NHC7 312 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 MYO19Q96H55 970 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 OXNAD1Q96HP4 312 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 ARHGAP26Q9UNA1 814 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 SMCHD1A6NHR9 2005 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 QSER1Q2KHR3 1735 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 ALDH1A2O94788 518 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 GUCA1CO95843 209 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 DDX6P26196 483 aaKnown RBP eCLIP10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 CXCR3P49682 368 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 ZBTB6Q15916 424 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF572Q7Z3I7 529 aaPredicted RBP10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 ANKS1BQ7Z6G8 1248 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 RTN4RL1Q86UN2 441 aaPredicted RBP10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 C12orf50Q8NA57 414 aaPredicted RBP10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 TLCD1Q96CP7 247 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 OSBPL2Q9H1P3 480 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 CXCL16Q9H2A7 254 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 DCDC2Q9UHG0 476 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 APPL1Q9UKG1 709 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 F5P12259 2224 aa10.71□□□□□ -0.7
CARMIL3-202ENST00000559694 H3BQ06 376 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 INPP4BO15327 924 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 POP4O95707 220 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CYP11A1P05108 521 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CAMK2GQ13555 558 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 DSC3Q14574 896 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PDGFRLQ15198 375 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 RHBDF2Q6PJF5 856 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PIGWQ7Z7B1 504 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF567Q8N184 647 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 RASGEF1CQ8N431 466 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 NIPA2Q8N8Q9 360 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 A0A096LPK6 155 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ZNF840PA6NDX5 716 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 LEFTY2O00292 366 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PHGDHO43175 533 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 SNAP91O60641 907 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PRNPP04156 253 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 HNRNPA1P09651 372 aaKnown RBP eCLIP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 NUDT2P50583 147 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FOXD4Q12950 439 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PTPRNQ16849 979 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 POTEHQ6S545 545 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 C6orf89Q6UWU4 347 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 SYTL1Q8IYJ3 562 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ART4Q93070 314 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PANX3Q96QZ0 392 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 NDNQ99608 321 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 TRIM15Q9C019 465 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CCDC90BQ9GZT6 254 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FBXO6Q9NRD1 293 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PCDHGB4Q9UN71 923 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 BCLAF3A2AJT9 711 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 C2orf78A6NCI8 922 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 WFS1O76024 890 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 SLC25A14O95258 325 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ADH5P11766 374 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CNTFP26441 200 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 UBE3AQ05086 875 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 IL10RBQ08334 325 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PPIDQ08752 370 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 MBLAC2Q68D91 279 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 C16orf89Q6UX73 402 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ACDQ96AP0 544 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PHF21BQ96EK2 531 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CERS2Q96G23 380 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 EBNA1BP2Q99848 306 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 HERC2P3Q9BVR0 1158 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ABCG8Q9H221 673 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 SFXN1Q9H9B4 322 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ZFYVE1Q9HBF4 777 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CYTH4Q9UIA0 394 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 TDRKHQ9Y2W6 561 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 ABLIM1O14639 778 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 AKAP10O43572 662 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 NDST3O95803 873 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 RBP1P09455 135 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 TYRP14679 529 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FGFR3P22607 806 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CDH5P33151 784 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 TIE1P35590 1138 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 CTBP1Q13363 440 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM151BQ6UXP7 276 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 POU5F2Q8N7G0 328 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 PYDC1Q8WXC3 89 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 EZH1Q92800 747 aaPredicted RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 IRF7Q92985 503 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FEM1CQ96JP0 617 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 FAM210AQ96ND0 272 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 HEPHQ9BQS7 1158 aa10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 MRPL1Q9BYD6 325 aaKnown RBP10.7□□□□□ -0.7
CARMIL3-202ENST00000559694 SLC25A51Q9H1U9 297 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms