RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 SLC13A1Q9BZW2 595 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 TRIM5Q9C035 493 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 CCDC86Q9H6F5 360 aaKnown RBP17.69■□□□□ 0.42
SMAD3-210ENST00000559092 SPTLC3Q9NUV7 552 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 SALL4Q9UJQ4 1053 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 PHTF1Q9UMS5 762 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 COQ6Q9Y2Z9 468 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 ZZEF1O43149 2961 aa17.69■□□□□ 0.42
SMAD3-210ENST00000559092 LMO7DNF2Z398 122 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 MATN3O15232 486 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 MFSD11O43934 449 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 KRT37O76014 449 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 RECQL5O94762 991 aaPredicted RBP17.68■□□□□ 0.42
SMAD3-210ENST00000559092 PRKCGP05129 697 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 GP1BAP07359 652 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 HOXC4P09017 264 aaPredicted RBP17.68■□□□□ 0.42
SMAD3-210ENST00000559092 KDELR1P24390 212 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 GJC1P36383 396 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 PPARDQ03181 441 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 FAXCQ5TGI0 409 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 LRRC38Q5VT99 294 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 PHACTR4Q8IZ21 702 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 SDR16C5Q8N3Y7 309 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 PQLC3Q8N755 202 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 APOLD1Q96LR9 279 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 IL12RB2Q99665 862 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 ANP32EQ9BTT0 268 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 APOOQ9BUR5 198 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 APOBEC3BQ9UH17 382 aaKnown RBP17.68■□□□□ 0.42
SMAD3-210ENST00000559092 DMXL2Q8TDJ6 3036 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 ZFHX4Q86UP3 3567 aa17.68■□□□□ 0.42
SMAD3-210ENST00000559092 TTC24A2A3L6 582 aaPredicted RBP17.67■□□□□ 0.42
SMAD3-210ENST00000559092 FAM149AA5PLN7 773 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 TRABD2BA6NFA1 517 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 SRRM3A6NNA2 597 aaPredicted RBP17.67■□□□□ 0.42
SMAD3-210ENST00000559092 NEBLO76041 1014 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 KRT10P13645 584 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 SLC1A1P43005 524 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 SEMG2Q02383 582 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 NFATC4Q14934 902 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 PRRT3Q5FWE3 981 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 ZFYVE27Q5T4F4 411 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 ARMC12Q5T9G4 340 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 HES3Q5TGS1 186 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 KDM7AQ6ZMT4 941 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 PROSER1Q86XN7 944 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 CBARPQ8N350 705 aaPredicted RBP17.67■□□□□ 0.42
SMAD3-210ENST00000559092 FSTL5Q8N475 847 aaPredicted RBP17.67■□□□□ 0.42
SMAD3-210ENST00000559092 LMX1AQ8TE12 382 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 PDCD6IPQ8WUM4 868 aaKnown RBP17.67■□□□□ 0.42
SMAD3-210ENST00000559092 RAPGEF5Q92565 580 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 SCRN2Q96FV2 425 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 RNF157Q96PX1 679 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 POLR1EQ9GZS1 481 aaKnown RBP17.67■□□□□ 0.42
SMAD3-210ENST00000559092 NT5MQ9NPB1 228 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 B4GALT6Q9UBX8 382 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 PPIL1Q9Y3C6 166 aa17.67■□□□□ 0.42
SMAD3-210ENST00000559092 PGLSO95336 258 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 CPP00450 1065 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 CYP2A6P11509 494 aaPredicted RBP17.66■□□□□ 0.42
SMAD3-210ENST00000559092 VIPR1P32241 457 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 TRIM23P36406 574 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 HK3P52790 923 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 MAXP61244 160 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 GBE1Q04446 702 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 TRAF2Q12933 501 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 ALG1LQ6GMV1 187 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 LVRNQ6Q4G3 990 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 NDUFAF2Q8N183 169 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 GLMNQ92990 594 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 COQ10AQ96MF6 247 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 SEMA3CQ99985 751 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 CAAP1Q9H8G2 361 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 RBM22Q9NW64 420 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMAD3-210ENST00000559092 PNMA8BQ9ULN7 279 aaPredicted RBP17.66■□□□□ 0.42
SMAD3-210ENST00000559092 OR1A2Q9Y585 309 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 RAI2Q9Y5P3 530 aa17.66■□□□□ 0.42
SMAD3-210ENST00000559092 DOCK9Q9BZ29 2069 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 LY6G6EA0A0G2JKS1 128 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 PSMD11O00231 422 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 TAF4O00268 1085 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 TNFRSF10CO14798 259 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 GCATO75600 419 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 HEXIM1O94992 359 aaKnown RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 RASGRP1O95267 797 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 PCCBP05166 539 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 CCNB1P14635 433 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 KELP23276 732 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 RPIAP49247 311 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 KIAA1024LP59773 190 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 INSM1Q01101 510 aaPredicted RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 TARDBPQ13148 414 aaKnown RBP eCLIP17.65■□□□□ 0.425e-9■■■■■ 30.1
SMAD3-210ENST00000559092 ACOX1Q15067 660 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 ELOCQ15369 112 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 ESRP1Q6NXG1 681 aaKnown RBP17.65■□□□□ 0.42
SMAD3-210ENST00000559092 ENPP7Q6UWV6 458 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 MARCH9Q86YJ5 346 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 RBFAQ8N0V3 343 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 DCBLD1Q8N8Z6 715 aa17.65■□□□□ 0.42
SMAD3-210ENST00000559092 TC2NQ8N9U0 490 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms