RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 HNRNPKP61978 463 aaKnown RBP eCLIP11.31□□□□□ -0.6
BMP4-204ENST00000558961 YPEL5P62699 121 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
BMP4-204ENST00000558961 SMAD1Q15797 465 aaKnown RBP11.31□□□□□ -0.6
BMP4-204ENST00000558961 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 TPRG1LQ5T0D9 272 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 CFAP58Q5T655 872 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 LRRC38Q5VT99 294 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 ERAP2Q6P179 960 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 TMPRSS7Q7RTY8 843 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 MAP7D3Q8IWC1 876 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 SLC35F6Q8N357 371 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 BBS5Q8N3I7 341 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 EID2Q8N6I1 236 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 PQLC3Q8N755 202 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 KDF1Q8NAX2 398 aaPredicted RBP11.31□□□□□ -0.6
BMP4-204ENST00000558961 OR4C6Q8NH72 309 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 KIF18AQ8NI77 898 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 CNDP2Q96KP4 475 aaKnown RBP11.31□□□□□ -0.6
BMP4-204ENST00000558961 CALR3Q96L12 384 aaKnown RBP11.31□□□□□ -0.6
BMP4-204ENST00000558961 TSGA13Q96PP4 275 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 WRAP53Q9BUR4 548 aaKnown RBP11.31□□□□□ -0.6
BMP4-204ENST00000558961 AMACRQ9UHK6 382 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 GUCA1BQ9UMX6 200 aa11.31□□□□□ -0.6
BMP4-204ENST00000558961 C3orf70A6NLC5 250 aaPredicted RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 TRIM38O00635 465 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 CAPNS1P04632 268 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 GM2AP17900 193 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 KDELR1P24390 212 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 ACP1P24666 158 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 GJC1P36383 396 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 SSR1P43307 286 aaKnown RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 MMP13P45452 471 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 LIG3P49916 1009 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 PEX5P50542 639 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 POLR2LP62875 67 aaKnown RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 ILKQ13418 452 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 PDE1CQ14123 709 aaPredicted RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 PTK2BQ14289 1009 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 MESDQ14696 234 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 IRF4Q15306 451 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 ST3GAL2Q16842 350 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 WSCD2Q2TBF2 565 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 ZNF569Q5MCW4 686 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 MARC1Q5VT66 337 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 PAPD7Q5XG87 772 aaKnown RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 TIGD7Q6NT04 549 aaPredicted RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 MACC1Q6ZN28 852 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 GALNT15Q8N3T1 639 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 KCTD6Q8NC69 237 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 ZNF548Q8NEK5 533 aaPredicted RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 HDAC11Q96DB2 347 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 RNF157Q96PX1 679 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 MBNL1Q9NR56 388 aaKnown RBP11.3□□□□□ -0.6
BMP4-204ENST00000558961 UCKL1Q9NWZ5 548 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 NLGN3Q9NZ94 848 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 PPIL1Q9Y3C6 166 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 CSNK1G3Q9Y6M4 447 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 CAPN6Q9Y6Q1 641 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 EPG5Q9HCE0 2579 aa11.3□□□□□ -0.6
BMP4-204ENST00000558961 MYLKQ15746 1914 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 H3BM21 787 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 SCAMP1O15126 338 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 MATN3O15232 486 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 SIGLEC6O43699 453 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 FZD6O60353 706 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 RFPL3O75679 317 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 CKMT2P17540 419 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 CCNCP24863 283 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 SLC1A1P43005 524 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 TRAF2Q12933 501 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 EIF2B5Q13144 721 aaKnown RBP11.29□□□□□ -0.6
BMP4-204ENST00000558961 DNAJC3Q13217 504 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 MTM1Q13496 603 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 LRRC14Q15048 493 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
BMP4-204ENST00000558961 SLC9A4Q6AI14 798 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 LIPIQ6XZB0 460 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 PLD5Q8N7P1 536 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 FAM181AQ8N9Y4 354 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 NSMCE1Q8WV22 266 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 MCCC1Q96RQ3 725 aaPredicted RBP11.29□□□□□ -0.6
BMP4-204ENST00000558961 CAAP1Q9H8G2 361 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 SCUBE2Q9NQ36 999 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 DNAJC28Q9NX36 388 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 DTLQ9NZJ0 730 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 KLF15Q9UIH9 416 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 PNMA8BQ9ULN7 279 aaPredicted RBP11.29□□□□□ -0.6
BMP4-204ENST00000558961 COQ6Q9Y2Z9 468 aa11.29□□□□□ -0.6
BMP4-204ENST00000558961 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
BMP4-204ENST00000558961 MACROD2A1Z1Q3 448 aa11.28□□□□□ -0.6
BMP4-204ENST00000558961 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
BMP4-204ENST00000558961 NEMP2A6NFY4 417 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms