RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, human

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG21-208	ENST00000558943	MRGPRE	Q86SM8	312 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	C14orf80	Q86SX3	495 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	OR2T3	Q8NH03	318 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	MAPK15	Q8TD08	544 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	SSC4D	Q8WTU2	575 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	SPATA17	Q96L03	361 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	RPL10L	Q96L21	214 aa	Known RBP	4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	C16orf92	Q96LL3	132 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	SRPK1	Q96SB4	655 aa	Known RBP	4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	DNAJC7	Q99615	494 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	LSG1	Q9H089	658 aa	Known RBP	4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	BHMT2	Q9H2M3	363 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	ADNP	Q9H2P0	1102 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	ERVMER34-1	Q9H9K5	563 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	SGK2	Q9HBY8	427 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	DPP3	Q9NY33	737 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	SEPT10	Q9P0V9	454 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	TRPS1	Q9UHF7	1281 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	PLAA	Q9Y263	795 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	DERA	Q9Y315	318 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	PCDHGA8	Q9Y5G5	932 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	GOLGA4	Q13439	2230 aa	Known RBP	4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	ITPR3	Q14573	2671 aa		4.98	□□□□□ -1.61
SPG21-208	ENST00000558943	PI4KA	P42356	2102 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943		A0A087X0B3	334 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943		A0A1W2PPC4	97 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943		A1L4Q6	167 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	TRIM38	O00635	465 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	TIMM44	O43615	452 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	NEMF	O60524	1076 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	MAGEC1	O60732	1142 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	VPS4B	O75351	444 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	TOX4	O94842	621 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	OAS1	P00973	400 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	CISD3	P0C7P0	127 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	IRF1	P10914	325 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	CKMT1A	P12532	417 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	GSPT1	P15170	499 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	BDNF	P23560	247 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	RPA1	P27694	616 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	PCSK1	P29120	753 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	PNPLA4	P41247	253 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	TRAPPC10	P48553	1259 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	LHX1	P48742	406 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	COPA	P53621	1224 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	NXPH1	P58417	271 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	NOP14	P78316	857 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	ZBTB16	Q05516	673 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	SPIDR	Q14159	915 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	MAPRE1	Q15691	268 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	TTC31	Q49AM3	519 aa	Predicted RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	MANEA	Q5SRI9	462 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	SFMBT2	Q5VUG0	894 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	SERPINA13P	Q6UXR4	307 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	FGD2	Q7Z6J4	655 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	TICAM1	Q8IUC6	712 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	ZZZ3	Q8IYH5	903 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	CMTM4	Q8IZR5	234 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	TMEM86A	Q8N2M4	240 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	PDCL2	Q8N4E4	241 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	WDR36	Q8NI36	951 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	GTF3C6	Q969F1	213 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	ARL8A	Q96BM9	186 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	ATXN7L3B	Q96GX2	97 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	MNT	Q99583	582 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	NTPCR	Q9BSD7	190 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	CIPC	Q9C0C6	399 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	CCSER1	Q9C0I3	900 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	C17orf75	Q9HAS0	396 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	LRWD1	Q9UFC0	647 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	LSM7	Q9UK45	103 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	VPS4A	Q9UN37	437 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	PLA2G4C	Q9UP65	541 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	HELZ	P42694	1942 aa	Known RBP	4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	DOPEY2	Q9Y3R5	2298 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943	PTPRJ	Q12913	1337 aa		4.97	□□□□□ -1.61
SPG21-208	ENST00000558943		A0A0A6YYJ9	748 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943		A0A1B0GVM2	712 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	LRRC72	A6NJI9	287 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	CDRT15L2	A8MXV6	281 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943		H0YCG3	227 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	OGT	O15294	1046 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	COCH	O43405	550 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	SDC3	O75056	442 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	WNT1	P04628	370 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	IGHV4-34	P06331	123 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	GP1BA	P07359	652 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	OR52Z1	P0C646	297 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	ALPPL2	P10696	532 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	YWHAQ	P27348	245 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	PDIA3	P30101	505 aa	Known RBP	4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	ADRA1B	P35368	520 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	FLT3	P36888	993 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	DCT	P40126	519 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	KIR2DL3	P43628	341 aa		4.96	□□□□□ -1.62
SPG21-208	ENST00000558943	LIG4	P49917	911 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms