RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 NIPAL4Q0D2K0 466 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 STIM1Q13586 685 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 CRYMQ14894 314 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 TMEM266Q2M3C6 531 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 C2orf68Q2NKX9 166 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SUPT20HL1Q3ZLR7 823 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 MMEL1Q495T6 779 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SLC9C1Q4G0N8 1177 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 TMEM63BQ5T3F8 832 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 LRIF1Q5T3J3 769 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 C1QTNF12Q5T7M4 302 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 MEX3CQ5U5Q3 659 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 KIAA1614Q5VZ46 1190 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 RUSC1-AS1Q66K80 236 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 NUGGCQ68CJ6 796 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 JADE1Q6IE81 842 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 MIS18BP1Q6P0N0 1132 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 TMEM154Q6P9G4 183 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SLC2A7Q6PXP3 512 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 FAM83HQ6ZRV2 1179 aaPredicted RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 FAM47EQ6ZV65 393 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 FAM57BQ71RH2 274 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 CNGA4Q8IV77 575 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 FAM217AQ8IXS0 508 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 RPAP2Q8IXW5 612 aaPredicted RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 PARP16Q8N5Y8 322 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 DPP10Q8N608 796 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 ZBTB2Q8N680 514 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 POC5Q8NA72 575 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 KDM1BQ8NB78 822 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 OR14L1PQ8NHC6 308 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 HUS1BQ8NHY5 278 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 CEP76Q8TAP6 659 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 NOC3LQ8WTT2 800 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 ERGIC1Q969X5 290 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SLC22A18Q96BI1 424 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 MSI2Q96DH6 328 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 ARHGEF26Q96DR7 871 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 ZMAT2Q96NC0 199 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 GAD1Q99259 594 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 PAFAH2Q99487 392 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 QTRT1Q9BXR0 403 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 MAK16Q9BXY0 300 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 POLDIP3Q9BY77 421 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 KLHL4Q9C0H6 718 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 B3GNT4Q9C0J1 378 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 ANKRD2Q9GZV1 360 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SIL1Q9H173 461 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 NDST4Q9H3R1 872 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 PLK3Q9H4B4 646 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 PDZD7Q9H5P4 517 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SH2D4AQ9H788 454 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 MAP6D1Q9H9H5 199 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SLC28A3Q9HAS3 691 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 MAGEE1Q9HCI5 957 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 RANGRFQ9HD47 186 aaPredicted RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 LTB4R2Q9NPC1 389 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 PNRC2Q9NPJ4 139 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 ASAH2Q9NR71 780 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 THSD1Q9NS62 852 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 MRGBPQ9NV56 204 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 TMEM45AQ9NWC5 275 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 PAG1Q9NWQ8 432 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 WSB2Q9NYS7 404 aaPredicted RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 MSRB1Q9NZV6 116 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 DLGAP2Q9P1A6 1054 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 ZNF580Q9UK33 172 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 COG5Q9UP83 839 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 CARD8Q9Y2G2 431 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 R3HDM2Q9Y2K5 976 aaKnown RBP1.7□□□□□ -2.14
USP3-209ENST00000558925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.7□□□□□ -2.14
USP3-209ENST00000558925 ZNF711Q9Y462 761 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 SESN1Q9Y6P5 492 aa1.7□□□□□ -2.14
USP3-209ENST00000558925 A0A096LPK6 155 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 KIR2DS5A0A0G2JLQ3 304 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 A0A1W2PR77 199 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 A0A1W2PRG0 241 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 OR2A25A4D2G3 310 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 F8W810 466 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 STMND1H3BQB6 276 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 CCER2I3L3R5 266 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 KIR2DS3K7RE56 304 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 VCYO14598 125 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ATP2A1O14983 1001 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 ADAMDEC1O15204 470 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 RNMTO43148 476 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 PAPSS1O43252 624 aaPredicted RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 PLRG1O43660 514 aaKnown RBP1.69□□□□□ -2.14
USP3-209ENST00000558925 HS6ST1O60243 411 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 BCAR3O75815 825 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 PSMD10O75832 226 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 KCNK5O95279 499 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 LATS1O95835 1130 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 FTCDO95954 541 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 CBSLP0DN79 551 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 CTSAP10619 480 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 IRF1P10914 325 aa1.69□□□□□ -2.14
USP3-209ENST00000558925 MMP9P14780 707 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms