RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 KLQ9UEF7 1012 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 CNOT8Q9UFF9 292 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 SEPT3Q9UH03 358 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 GPR34Q9UPC5 381 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 SATB2Q9UPW6 733 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 COQ6Q9Y2Z9 468 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 SHROOM3Q8TF72 1996 aa13.7□□□□□ -0.22
SNRPA1-204ENST00000558020 A0A1W2PQC6 194 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 KLK10O43240 276 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 ELFN1P0C7U0 828 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 MIPP30301 263 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 ARL4AP40617 200 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 SCNN1BP51168 640 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 AP1S1P61966 158 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 ALG11Q2TAA5 492 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 PERM1Q5SV97 790 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 AFMIDQ63HM1 303 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 NSMCE1Q8WV22 266 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 PSKH2Q96QS6 385 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 SNRNP25Q9BV90 132 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 STRADBQ9C0K7 418 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 SYNDIG1Q9H7V2 258 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 ASCL3Q9NQ33 180 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 OR1A2Q9Y585 309 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 ENTPD2Q9Y5L3 495 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 DGKBQ9Y6T7 804 aa13.69□□□□□ -0.22
SNRPA1-204ENST00000558020 CCDC187A0A096LP49 1063 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 H3BRJ5 948 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 TNFRSF10CO14798 259 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 RECQL5O94762 991 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 PCCBP05166 539 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 HOXC4P09017 264 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 PCK1P35558 622 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 HSPA9P38646 679 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 PRKCIP41743 596 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 EIF3IQ13347 325 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 CA9Q16790 459 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 CRTC1Q6UUV9 634 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 ZNF571Q7Z3V5 609 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 OR56A4Q8NGH8 313 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 PCDH19Q8TAB3 1148 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 ZNF653Q96CK0 615 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 ECHDC3Q96DC8 303 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 GFM1Q96RP9 751 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 KCTD15Q96SI1 283 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 CWC15Q9P013 229 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 SIRPGQ9P1W8 387 aa13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 PNMA8BQ9ULN7 279 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 BZW2Q9Y6E2 419 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-204ENST00000558020 ZW10O43264 779 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 ATMINO43313 823 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 TNFSF15O95150 251 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 SERPINC1P01008 464 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 KRT10P13645 584 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 ZNF165P49910 485 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 KIAA1024LP59773 190 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 TPM4P67936 248 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 RHDQ02161 417 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 PIGHQ14442 188 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 ZNF235Q14590 738 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 ACOX1Q15067 660 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 TMCO3Q6UWJ1 677 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 LIPIQ6XZB0 460 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 DPPA4Q7L190 304 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 TAF8Q7Z7C8 310 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 ARHGAP12Q8IWW6 846 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 ARFGAP1Q8N6T3 406 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 FAM46DQ8NEK8 389 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 TMEM74Q96NL1 305 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 RBM15Q96T37 977 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 MYO1AQ9UBC5 1043 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
SNRPA1-204ENST00000558020 KALRNO60229 2985 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 ERVH48-1M5A8F1 160 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 NTN3O00634 580 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 SOCS5O75159 536 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 LRCH4O75427 683 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 PRKCGP05129 697 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 GLB1P16278 677 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 SERPINB6P35237 376 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 TRIM23P36406 574 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 RGRP47804 291 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 VAC14Q08AM6 782 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 PEX6Q13608 980 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 DPYSQ14117 519 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 TAF1BQ53T94 588 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 RALGPS1Q5JS13 557 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 PNCKQ6P2M8 343 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 ZSWIM9Q86XI8 627 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 KYQ8NBH2 561 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 CCDC74AQ96AQ1 378 aa13.66□□□□□ -0.22
SNRPA1-204ENST00000558020 WBP1Q96G27 269 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms