RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KCTD11Q693B1 232 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CTAGE6Q86UF2 777 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CTAGE4Q8IX94 777 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 TMEFF1Q8IYR6 380 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CCHCR1Q8TD31 782 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CXorf40AQ8TE69 158 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 SCRN2Q96FV2 425 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 WRAP53Q9BUR4 548 aaKnown RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 C6orf106Q9H6K1 298 aaPredicted RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 B4GALT6Q9UBX8 382 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 A0A0J9YYE9 177 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 ERI2A8K979 691 aaKnown RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 LILRB5O75023 590 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 FSBPO95073 299 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 TRBC1P01850 177 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 ATXN1LP0C7T5 689 aaKnown RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 HLA-DPA1P20036 260 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 ADRA1AP35348 466 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 HNF1BP35680 557 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 MMP12P39900 470 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 PTPN5P54829 565 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 SIM2Q14190 667 aaPredicted RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 SLC1A5Q15758 541 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 LPCAT2Q7L5N7 544 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 MAATS1Q7Z4T9 603 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 KLHDC8BQ8IXV7 354 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CEP112Q8N8E3 955 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 TRIM51Q9BSJ1 452 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 PPIL1Q9Y3C6 166 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.35■■□□□ 1.01
CASC4-204ENST00000557945 A0A1W2PQU0 124 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 CAPN8A6NHC0 703 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 NPIPB15A6NHN6 443 aaPredicted RBP21.35■■□□□ 1.01
CASC4-204ENST00000557945 MMP20O60882 483 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 PIRTP0C851 137 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 VIPR1P32241 457 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 ELF2Q15723 593 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 TMEM52BQ4KMG9 183 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 KIAA0895LQ68EN5 471 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 NAPEPLDQ6IQ20 393 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 RANBP10Q6VN20 620 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 PRR23BQ6ZRT6 265 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 DPPA4Q7L190 304 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 SNX19Q92543 992 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 ATOH1Q92858 354 aaPredicted RBP21.35■■□□□ 1.01
CASC4-204ENST00000557945 MCCC1Q96RQ3 725 aaPredicted RBP21.35■■□□□ 1.01
CASC4-204ENST00000557945 CARD6Q9BX69 1037 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 IRF2BPLQ9H1B7 796 aa21.35■■□□□ 1.01
CASC4-204ENST00000557945 FAM187AA6NFU0 413 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 RAD51CO43502 376 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 FGF1P05230 155 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 MAT2AP31153 395 aaKnown RBP21.34■■□□□ 1.01
CASC4-204ENST00000557945 PPP2CBP62714 309 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 RPS21P63220 83 aaKnown RBP21.34■■□□□ 1.01
CASC4-204ENST00000557945 PPP2CAP67775 309 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 ARHGEF7Q14155 803 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 SEL1L3Q68CR1 1132 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 NEK5Q6P3R8 708 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 PPP1R21Q6ZMI0 780 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 ARMCX6Q7L4S7 300 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 LINC00523Q86TU6 105 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 HORMAD1Q86X24 394 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 CADM4Q8NFZ8 388 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 KLK6Q92876 244 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 PCED1AQ9H1Q7 454 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 KCNH6Q9H252 994 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 EIF2B3Q9NR50 452 aaKnown RBP21.34■■□□□ 1.01
CASC4-204ENST00000557945 HCN4Q9Y3Q4 1203 aa21.34■■□□□ 1.01
CASC4-204ENST00000557945 A0A0U1RQS6 177 aa21.33■■□□□ 1
CASC4-204ENST00000557945 MEI4A8MW99 385 aa21.33■■□□□ 1
CASC4-204ENST00000557945 RHOBTB1O94844 696 aa21.33■■□□□ 1
CASC4-204ENST00000557945 ELFN1P0C7U0 828 aa21.33■■□□□ 1
CASC4-204ENST00000557945 LIG3P49916 1009 aa21.33■■□□□ 1
CASC4-204ENST00000557945 RALGDSQ12967 914 aa21.33■■□□□ 1
CASC4-204ENST00000557945 PLK5Q496M5 336 aa21.33■■□□□ 1
CASC4-204ENST00000557945 DENND2CQ68D51 928 aa21.33■■□□□ 1
CASC4-204ENST00000557945 KIAA1161Q6NSJ0 714 aa21.33■■□□□ 1
CASC4-204ENST00000557945 TSPAN33Q86UF1 283 aa21.33■■□□□ 1
CASC4-204ENST00000557945 FOXJ1Q92949 421 aa21.33■■□□□ 1
CASC4-204ENST00000557945 HSPA12BQ96MM6 686 aa21.33■■□□□ 1
CASC4-204ENST00000557945 TRIM31Q9BZY9 425 aa21.33■■□□□ 1
CASC4-204ENST00000557945 DUSP15Q9H1R2 295 aaPredicted RBP21.33■■□□□ 1
CASC4-204ENST00000557945 PIH1D1Q9NWS0 290 aaKnown RBP21.33■■□□□ 1
CASC4-204ENST00000557945 ZFR2Q9UPR6 939 aaKnown RBP21.33■■□□□ 1
CASC4-204ENST00000557945 ABCA7Q8IZY2 2146 aa21.33■■□□□ 1
CASC4-204ENST00000557945 PLXND1Q9Y4D7 1925 aa21.32■■□□□ 1
CASC4-204ENST00000557945 CACNA1HO95180 2353 aa21.32■■□□□ 1
CASC4-204ENST00000557945 IGLON5A6NGN9 336 aa21.32■■□□□ 1
CASC4-204ENST00000557945 METTL12A8MUP2 240 aa21.32■■□□□ 1
CASC4-204ENST00000557945 SUN1O94901 812 aa21.32■■□□□ 1
CASC4-204ENST00000557945 LHCGRP22888 699 aa21.32■■□□□ 1
CASC4-204ENST00000557945 DHPSP49366 369 aaPredicted RBP21.32■■□□□ 1
CASC4-204ENST00000557945 CCR5P51681 352 aa21.32■■□□□ 1
CASC4-204ENST00000557945 LPAL2Q16609 132 aa21.32■■□□□ 1
CASC4-204ENST00000557945 LRRC66Q68CR7 880 aa21.32■■□□□ 1
CASC4-204ENST00000557945 PMS2CLQ68D20 193 aa21.32■■□□□ 1
CASC4-204ENST00000557945 CRTC1Q6UUV9 634 aa21.32■■□□□ 1
CASC4-204ENST00000557945 TRIM69Q86WT6 500 aa21.32■■□□□ 1
CASC4-204ENST00000557945 DNAAF3Q8N9W5 541 aa21.32■■□□□ 1
CASC4-204ENST00000557945 OR52K1Q8NGK4 314 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms